RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 AMFRQ9UKV5 643 aa3.62□□□□□ -1.83
UBE2D3-226ENST00000508635 RIMKLBQ9ULI2 386 aa3.62□□□□□ -1.83
UBE2D3-226ENST00000508635 SLC8A2Q9UPR5 921 aa3.62□□□□□ -1.83
UBE2D3-226ENST00000508635 MAN2B2Q9Y2E5 1009 aa3.62□□□□□ -1.83
UBE2D3-226ENST00000508635 PCDHGB2Q9Y5G2 931 aa3.62□□□□□ -1.83
UBE2D3-226ENST00000508635 COX11Q9Y6N1 276 aa3.62□□□□□ -1.83
UBE2D3-226ENST00000508635 OBSL1O75147 1896 aa3.62□□□□□ -1.83
UBE2D3-226ENST00000508635 CFAP54Q96N23 3096 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 GTPBP10A4D1E9 387 aaKnown RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 AREL1O15033 823 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 P4HA2O15460 535 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 HOXC11O43248 304 aaPredicted RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 SPRY2O43597 315 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 LRP3O75074 770 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 JTBO76095 146 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 LETM1O95202 739 aaPredicted RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 KAT7O95251 611 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 APBB3O95704 486 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 TBX18O95935 607 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 NHLRC4P0CG21 123 aaPredicted RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 EPB41P11171 864 aaKnown RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 TRIM21P19474 475 aaKnown RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 ATP5C1P36542 298 aaKnown RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 EIF2DP41214 584 aaKnown RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 MXI1P50539 228 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 RAD23BP54727 409 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 STX17P56962 302 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 PROK1P58294 105 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 KRTAP10-7P60409 375 aaPredicted RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 SUMO2P61956 95 aaKnown RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 MRPS21P82921 87 aaKnown RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 ARHGAP8P85298 464 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 HOXA4Q00056 320 aaPredicted RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 GAD2Q05329 585 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 DMC1Q14565 340 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 KLHL40Q2TBA0 621 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 DPCR1Q3MIW9 517 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 CBWD6Q4V339 395 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 RNASE12Q5GAN4 147 aaKnown RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 CBWD3Q5JTY5 395 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 CBWD5Q5RIA9 395 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 CCDC183Q5T5S1 534 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 KLHL10Q6JEL2 608 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 MZT2AQ6P582 158 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 ZNF788Q6ZQV5 615 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 DGLUCYQ7Z3D6 616 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 CACNA2D4Q7Z3S7 1137 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 SCD5Q86SK9 330 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 KBTBD6Q86V97 674 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 TMEM25Q86YD3 366 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 SFTPA1Q8IWL2 248 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 BBS7Q8IWZ6 715 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 TTC39CQ8N584 583 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 OR2C3Q8N628 320 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 TERB1Q8NA31 727 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 IL17RCQ8NAC3 791 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 SLC4A11Q8NBS3 891 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 FBXL13Q8NEE6 735 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 WBP2Q969T9 261 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 JAKMIP2Q96AA8 810 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 REPS1Q96D71 796 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 OTUB2Q96DC9 234 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 WDYHV1Q96HA8 205 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 ZC3H10Q96K80 434 aaKnown RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 BPIFA3Q9BQP9 254 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 FUCA2Q9BTY2 467 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 MAGEB5Q9BZ81 275 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 CIPCQ9C0C6 399 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 DNAI2Q9GZS0 605 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 NACA2Q9H009 215 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 HSD3B7Q9H2F3 369 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 THAP9Q9H5L6 903 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 NMUR1Q9HB89 426 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 TLR8Q9NR97 1041 aaKnown RBP3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 SPHK2Q9NRA0 654 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 CISHQ9NSE2 258 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 MGAT4CQ9UBM8 478 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 RAB23Q9ULC3 237 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 CAPN11Q9UMQ6 739 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 CNTN6Q9UQ52 1028 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 SCML2Q9UQR0 700 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 SLC27A6Q9Y2P4 619 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 CEP83Q9Y592 693 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 DCHS1Q96JQ0 3298 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 FANCMQ8IYD8 2048 aa3.61□□□□□ -1.83
UBE2D3-226ENST00000508635 MYO18AQ92614 2054 aaKnown RBP3.6□□□□□ -1.83
UBE2D3-226ENST00000508635 MYOFQ9NZM1 2061 aa3.6□□□□□ -1.83
UBE2D3-226ENST00000508635 PIEZO1Q92508 2521 aa3.6□□□□□ -1.83
UBE2D3-226ENST00000508635 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.6□□□□□ -1.83
UBE2D3-226ENST00000508635 MED19A0JLT2 244 aaPredicted RBP3.6□□□□□ -1.83
UBE2D3-226ENST00000508635 CLCA1A8K7I4 914 aa3.6□□□□□ -1.83
UBE2D3-226ENST00000508635 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.6□□□□□ -1.83
UBE2D3-226ENST00000508635 SGK1O00141 431 aa3.6□□□□□ -1.83
UBE2D3-226ENST00000508635 MASP2O00187 686 aa3.6□□□□□ -1.83
UBE2D3-226ENST00000508635 TULP2O00295 520 aa3.6□□□□□ -1.83
UBE2D3-226ENST00000508635 MDM4O15151 490 aa3.6□□□□□ -1.83
UBE2D3-226ENST00000508635 CACNG3O60359 315 aa3.6□□□□□ -1.83
UBE2D3-226ENST00000508635 COQ9O75208 318 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms