RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 HERPUD2Q9BSE4 406 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZDHHC5Q9C0B5 715 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 PCED1AQ9H1Q7 454 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 GLOD4Q9HC38 313 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 CD248Q9HCU0 757 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 DYRK4Q9NR20 520 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 DLL4Q9NR61 685 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 UCKL1Q9NWZ5 548 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 PAK5Q9P286 719 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 KLHL8Q9P2G9 620 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 SAE1Q9UBE0 346 aaPredicted RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 LHX3Q9UBR4 397 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 PCYOX1Q9UHG3 505 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 FZD4Q9ULV1 537 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 RPL26L1Q9UNX3 145 aaKnown RBP5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 NCKAP1Q9Y2A7 1128 aa5.51□□□□□ -1.53
HMGB1P44-201ENST00000508597 TRPM6Q9BX84 2022 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 TCRBV7S2A1N4TA0A589 114 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 TCRBV21S2A2A0A5A6 115 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 TSPAN11A1L157 253 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 KCNK1O00180 336 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 RNF103O00237 685 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZNF185O15231 689 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 HTRA2O43464 458 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 PI15O43692 258 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 AP1G1O43747 822 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 URI1O94763 535 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 KLHL18O94889 574 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 KNG1P01042 644 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 IL1BP01584 269 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 HLA-DQB2P05538 268 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 HLA-EP13747 358 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 GABRG2P18507 467 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 SLC8A1P32418 973 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 NUDT1P36639 197 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 WASP42768 502 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 GEMP55040 296 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 RPS14P62263 151 aaKnown RBP5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 CDK16Q00536 496 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 ELP6Q0PNE2 266 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 CST6Q15828 149 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 USP39Q53GS9 565 aaKnown RBP5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 SPDYCQ5MJ68 293 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 CFAP58Q5T655 872 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 ARMC12Q5T9G4 340 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 ARMC3Q5W041 872 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 CCDC70Q6NSX1 233 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 TRMT10BQ6PF06 316 aaKnown RBP5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 GDPD4Q6W3E5 623 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 SLC36A4Q6YBV0 504 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 ARHGEF18Q6ZSZ5 1173 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 GSTA5Q7RTV2 222 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 PCGF5Q86SE9 256 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 WDR5BQ86VZ2 330 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 PHYKPLQ8IUZ5 450 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 KLHDC8BQ8IXV7 354 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZNF567Q8N184 647 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 STK40Q8N2I9 435 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 PGBD5Q8N414 524 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 RYBPQ8N488 228 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 CEP112Q8N8E3 955 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 TMEM105Q8N8V8 129 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 ARRDC2Q8TBH0 407 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 C1orf54Q8WWF1 131 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 NELL1Q92832 810 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 FAM131CQ96AQ9 280 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 TADA1Q96BN2 335 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 FOXRED1Q96CU9 486 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 ECHDC3Q96DC8 303 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 IMP4Q96G21 291 aaKnown RBP5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 MS4A14Q96JA4 679 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 CAPZA3Q96KX2 299 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 MRGPRX1Q96LB2 322 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 AGAP3Q96P47 875 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 SEMA3CQ99985 751 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 TMEM121Q9BTD3 319 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 ADGRE3Q9BY15 652 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 TM6SF2Q9BZW4 377 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 GBA3Q9H227 469 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 PABPC3Q9H361 631 aaKnown RBP5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 SGK2Q9HBY8 427 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 PCDH9Q9HC56 1237 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 NT5MQ9NPB1 228 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 ZDHHC4Q9NPG8 344 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 ITM2CQ9NQX7 267 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 KCTD5Q9NXV2 234 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 SEPT10Q9P0V9 454 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 BCCIPQ9P287 314 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 FAM153AQ9UHL3 310 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 EVLQ9UI08 416 aaPredicted RBP5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 PHTF1Q9UMS5 762 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 R3HDM2Q9Y2K5 976 aaKnown RBP5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 PPIL1Q9Y3C6 166 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 MRFAP1Q9Y605 127 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 FANCMQ8IYD8 2048 aa5.5□□□□□ -1.53
HMGB1P44-201ENST00000508597 KMT2EQ8IZD2 1858 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 UBA6A0AVT1 1052 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 CTAGE15A4D2H0 777 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 H0Y858 1186 aa5.49□□□□□ -1.53
HMGB1P44-201ENST00000508597 KPNA3O00505 521 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms