RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 NCEH1Q6PIU2 408 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 MMS22LQ6ZRQ5 1243 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 ZNF534Q76KX8 674 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 PXKQ7Z7A4 578 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 EXOC8Q8IYI6 725 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 MAPK1IP1LQ8NDC0 245 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 SMPDL3BQ92485 455 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 SIX2Q9NPC8 291 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 INTS10Q9NVR2 710 aaKnown RBP4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 EHD2Q9NZN4 543 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 MMP24Q9Y5R2 645 aa4.19□□□□□ -1.74
UBE2D3-225ENST00000508476 TMEM8BA6NDV4 472 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 LIPT2A6NK58 231 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 IGLV1-44P01699 117 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 HSPA1AP0DMV8 641 aaKnown RBP4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 HSPA1BP0DMV9 641 aaKnown RBP4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 RARGP13631 454 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 EPHA2P29317 976 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 THOP1P52888 689 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 TFAP4Q01664 338 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 PRKAA1Q13131 559 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 MEP1AQ16819 746 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 FFAR4Q5NUL3 377 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 ACSM2BQ68CK6 577 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 SH2D5Q6ZV89 423 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 GALNT13Q8IUC8 556 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 CRYBG2Q8N1P7 616 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 NAXEQ8NCW5 288 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 TDRD7Q8NHU6 1098 aaKnown RBP4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 ART5Q96L15 291 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 PPM1MQ96MI6 270 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 ASCL2Q99929 193 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 CACNG5Q9UF02 275 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 CORO1CQ9ULV4 474 aaPredicted RBP4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 KCNJ14Q9UNX9 436 aa4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 MRPS28Q9Y2Q9 187 aaKnown RBP4.18□□□□□ -1.74
UBE2D3-225ENST00000508476 C15orf62A8K5M9 175 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 TMEM63AO94886 807 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 CCNDBP1O95273 360 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 HIST1H2ABP04908 130 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 CEACAM1P13688 526 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 HIST1H2ADP20671 130 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 KRT9P35527 623 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 PPP2R2BQ00005 443 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 LRMPQ12912 555 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 ASTE1Q2TB18 679 aaPredicted RBP4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 ZSCAN23Q3MJ62 389 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 ZFP69Q49AA0 526 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 CFAP77Q6ZQR2 320 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 TPRG1Q6ZUI0 275 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 TMTC3Q6ZXV5 915 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 HIST3H2AQ7L7L0 130 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 PDILTQ8N807 584 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 OR2T12Q8NG77 320 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 OR2A14Q96R47 310 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 RHNO1Q9BSD3 238 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 PLK3Q9H4B4 646 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 TRMT1Q9NXH9 659 aaKnown RBP4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 DBNLQ9UJU6 430 aaKnown RBP4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 PYGO1Q9Y3Y4 419 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 STK36Q9NRP7 1315 aa4.17□□□□□ -1.74
UBE2D3-225ENST00000508476 DISP3Q9P2K9 1392 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 KRTAP9-6A8MVA2 160 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 NADKO95544 446 aaPredicted RBP4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 NGFP01138 241 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 LIFP15018 202 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 CKMT2P17540 419 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 HOXA13P31271 388 aaPredicted RBP4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 CLK1P49759 484 aaKnown RBP4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 IRX1P78414 480 aaPredicted RBP4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 MFAP5Q13361 173 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 DENND5BQ6ZUT9 1274 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 HCAR2Q8TDS4 363 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 ZNF653Q96CK0 615 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 SLC47A1Q96FL8 570 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 C7orf26Q96N11 449 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 ZNF582Q96NG8 517 aaPredicted RBP4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 HGH1Q9BTY7 390 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 SLA2Q9H6Q3 261 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 FGF22Q9HCT0 170 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 PAG1Q9NWQ8 432 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 IRAK4Q9NWZ3 460 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 MIOSQ9NXC5 875 aa4.16□□□□□ -1.74
UBE2D3-225ENST00000508476 KRTAP16-1A8MUX0 517 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 B4E171 279 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 PSMD14O00487 310 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 SCAMP1O15126 338 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 CRLF1O75462 422 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 CD4P01730 458 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 ACP2P11117 423 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 TSPAN7P41732 249 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 RGS19P49795 217 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 MPP1Q00013 466 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 ITGA9Q13797 1035 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 PCGF3Q3KNV8 242 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 ALFQ53S48 1182 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 JAKMIP3Q5VZ66 844 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 ZDHHC20Q5W0Z9 365 aa4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 KIAA0930Q6ICG6 404 aaPredicted RBP4.15□□□□□ -1.75
UBE2D3-225ENST00000508476 DDHD1Q8NEL9 900 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms