RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 EPB41L1Q9H4G0 881 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 UCK1Q9HA47 277 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 SLC40A1Q9NP59 571 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 POT1Q9NUX5 634 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 SMOXQ9NWM0 555 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.02□□□□□ -0.16
RAB28-205ENST00000508274 AMFRQ9UKV5 643 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 PSMD13Q9UNM6 376 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 CAPN6Q9Y6Q1 641 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 HELZ2Q9BYK8 2649 aaKnown RBP14.02□□□□□ -0.17
RAB28-205ENST00000508274 PPFIA2O75334 1257 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 C9P02748 559 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 LPOP22079 712 aaPredicted RBP14.01□□□□□ -0.17
RAB28-205ENST00000508274 AKT1P31749 480 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 LEPRP48357 1165 aaKnown RBP14.01□□□□□ -0.17
RAB28-205ENST00000508274 RAB15P59190 212 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 MC2RQ01718 297 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 NFE2L1Q14494 772 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 LINC00303Q3SY05 128 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 DCAF12Q5T6F0 453 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 AGAP9Q5VTM2 703 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 DENND5AQ6IQ26 1287 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 WASH2PQ6VEQ5 465 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 AMZ2Q86W34 360 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 PLXDC1Q8IUK5 500 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 OR13C4Q8NGS5 318 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 ZNF398Q8TD17 642 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 EXTL1Q92935 676 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 CXorf40BQ96DE9 158 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 C9orf72Q96LT7 481 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 TGM7Q96PF1 710 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 WASH6PQ9NQA3 447 aa14.01□□□□□ -0.17
RAB28-205ENST00000508274 R3HDM2Q9Y2K5 976 aaKnown RBP14.01□□□□□ -0.17
RAB28-205ENST00000508274 AAR2Q9Y312 384 aaKnown RBP14.01□□□□□ -0.17
RAB28-205ENST00000508274 TCRBV7S2A1N4TA0A589 114 aa14□□□□□ -0.17
RAB28-205ENST00000508274 C2orf81A6NN90 581 aa14□□□□□ -0.17
RAB28-205ENST00000508274 CCL22O00626 93 aa14□□□□□ -0.17
RAB28-205ENST00000508274 CAPN5O15484 640 aaPredicted RBP14□□□□□ -0.17
RAB28-205ENST00000508274 RAD1O60671 282 aa14□□□□□ -0.17
RAB28-205ENST00000508274 POP7O75817 140 aaKnown RBP14□□□□□ -0.17
RAB28-205ENST00000508274 SRP72O76094 671 aaKnown RBP14□□□□□ -0.17
RAB28-205ENST00000508274 STK10O94804 968 aaKnown RBP14□□□□□ -0.17
RAB28-205ENST00000508274 AMD1P17707 334 aa14□□□□□ -0.17
RAB28-205ENST00000508274 VCLP18206 1134 aa14□□□□□ -0.17
RAB28-205ENST00000508274 CETN2P41208 172 aa14□□□□□ -0.17
RAB28-205ENST00000508274 GDF10P55107 478 aa14□□□□□ -0.17
RAB28-205ENST00000508274 PPP1CAP62136 330 aa14□□□□□ -0.17
RAB28-205ENST00000508274 TMPRSS15P98073 1019 aa14□□□□□ -0.17
RAB28-205ENST00000508274 DMPKQ09013 629 aa14□□□□□ -0.17
RAB28-205ENST00000508274 KIF5AQ12840 1032 aa14□□□□□ -0.17
RAB28-205ENST00000508274 KLF1Q13351 362 aaPredicted RBP14□□□□□ -0.17
RAB28-205ENST00000508274 PRPSAP1Q14558 356 aa14□□□□□ -0.17
RAB28-205ENST00000508274 FNBP1LQ5T0N5 605 aa14□□□□□ -0.17
RAB28-205ENST00000508274 CACNA2D3Q8IZS8 1091 aa14□□□□□ -0.17
RAB28-205ENST00000508274 IL22RA1Q8N6P7 574 aa14□□□□□ -0.17
RAB28-205ENST00000508274 TBL1YQ9BQ87 522 aa14□□□□□ -0.17
RAB28-205ENST00000508274 ASPSCR1Q9BZE9 553 aa14□□□□□ -0.17
RAB28-205ENST00000508274 SIDT1Q9NXL6 827 aaKnown RBP14□□□□□ -0.17
RAB28-205ENST00000508274 FAM8A1Q9UBU6 413 aa14□□□□□ -0.17
RAB28-205ENST00000508274 PILRAQ9UKJ1 303 aa14□□□□□ -0.17
RAB28-205ENST00000508274 CFAP20Q9Y6A4 193 aaKnown RBP14□□□□□ -0.17
RAB28-205ENST00000508274 C5orf60A6NFR6 353 aa14□□□□□ -0.17
RAB28-205ENST00000508274 KIF1CO43896 1103 aaKnown RBP14□□□□□ -0.17
RAB28-205ENST00000508274 LIFP15018 202 aa14□□□□□ -0.17
RAB28-205ENST00000508274 MSH3P20585 1137 aa14□□□□□ -0.17
RAB28-205ENST00000508274 CDC25BP30305 580 aa14□□□□□ -0.17
RAB28-205ENST00000508274 CAPZBP47756 277 aa14□□□□□ -0.17
RAB28-205ENST00000508274 SEPHS1P49903 392 aa14□□□□□ -0.17
RAB28-205ENST00000508274 ATP1A2P50993 1020 aa14□□□□□ -0.17
RAB28-205ENST00000508274 ZNF140P52738 457 aaPredicted RBP14□□□□□ -0.17
RAB28-205ENST00000508274 XIAPP98170 497 aa14□□□□□ -0.17
RAB28-205ENST00000508274 XKR5Q6UX68 686 aa14□□□□□ -0.17
RAB28-205ENST00000508274 UBL4BQ8N7F7 174 aa14□□□□□ -0.17
RAB28-205ENST00000508274 EXD3Q8N9H8 876 aa14□□□□□ -0.17
RAB28-205ENST00000508274 FAM71DQ8N9W8 422 aa14□□□□□ -0.17
RAB28-205ENST00000508274 SPRY4Q9C004 299 aa14□□□□□ -0.17
RAB28-205ENST00000508274 ASB8Q9H765 288 aa14□□□□□ -0.17
RAB28-205ENST00000508274 FBXO8Q9NRD0 319 aa14□□□□□ -0.17
RAB28-205ENST00000508274 MIF4GDA9UHW6 222 aaKnown RBP13.99□□□□□ -0.17
RAB28-205ENST00000508274 SGTAO43765 313 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 METTL18O95568 372 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 PTMAP06454 111 aaKnown RBP13.99□□□□□ -0.17
RAB28-205ENST00000508274 ANKRD34CP0C6C1 535 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 HALP42357 657 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 SH3BP2P78314 561 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 RPE65Q16518 533 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 LONRF2Q1L5Z9 754 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 KCTD11Q693B1 232 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 DUS1LQ6P1R4 473 aaKnown RBP13.99□□□□□ -0.17
RAB28-205ENST00000508274 CEACAM20Q6UY09 585 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 TIPARPQ7Z3E1 657 aaKnown RBP13.99□□□□□ -0.17
RAB28-205ENST00000508274 KLHDC8BQ8IXV7 354 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 SYCE1Q8N0S2 351 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 TAB3Q8N5C8 712 aaPredicted RBP13.99□□□□□ -0.17
RAB28-205ENST00000508274 LILRA3Q8N6C8 439 aaPredicted RBP13.99□□□□□ -0.17
RAB28-205ENST00000508274 HES6Q96HZ4 224 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 TMEM121Q9BTD3 319 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 FAM96AQ9H5X1 160 aa13.99□□□□□ -0.17
RAB28-205ENST00000508274 PIH1D1Q9NWS0 290 aaKnown RBP13.99□□□□□ -0.17
RAB28-205ENST00000508274 IMPACTQ9P2X3 320 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms