RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 GDPD1Q8N9F7 314 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 ZMIZ2Q8NF64 920 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 BPIFB6Q8NFQ5 453 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 DMBX1Q8NFW5 382 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 OR6M1Q8NGM8 313 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 TSPEARQ8WU66 669 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 DCAKDQ8WVC6 231 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 TFB1MQ8WVM0 346 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 NSMAFQ92636 917 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 VCPIP1Q96JH7 1222 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 DMRTB1Q96MA1 342 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 QRFPRQ96P65 431 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 DUSP26Q9BV47 211 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 HDHD5Q9BXW7 423 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 CPEB1Q9BZB8 566 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 MCUBQ9NWR8 336 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 DPP3Q9NY33 737 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 SH3BP4Q9P0V3 963 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 IFT80Q9P2H3 777 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 BTBD3Q9Y2F9 522 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 CDY1Q9Y6F8 540 aa10.71□□□□□ -0.69
PDLIM5-210ENST00000508216 RGPD1P0DJD0 1748 aa10.71□□□□□ -0.7
PDLIM5-210ENST00000508216 HSBP1L1C9JCN9 74 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 CDC7O00311 574 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 TREHO43280 583 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 TBX1O43435 398 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ULK1O75385 1050 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 CBR3O75828 277 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 TOP3BO95985 862 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 AHSGP02765 367 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 TNNI1P19237 187 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ME2P23368 584 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 EEF1B2P24534 225 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 CSKP41240 450 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 DPP6P42658 865 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 NUMBP49757 651 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 SUCLG1P53597 346 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ANTXR2P58335 489 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 RPP30P78346 268 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 PRKG2Q13237 762 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 TARBP2Q15633 366 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ZYXQ15942 572 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 KYAT1Q16773 422 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 KNOP1Q1ED39 458 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 MICBQ29980 383 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 PAN2Q504Q3 1202 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 EPC2Q52LR7 807 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ODR4Q5SWX8 454 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 CATSPEREQ5SY80 951 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 SLC25A25Q6KCM7 469 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ZBTB49Q6ZSB9 765 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 SLC13A5Q86YT5 568 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ZZZ3Q8IYH5 903 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 PGAM4Q8N0Y7 254 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 GLIS1Q8NBF1 620 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 PTERQ96BW5 349 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 TEPSINQ96N21 525 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 AGAP2Q99490 1192 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 FAM118BQ9BPY3 351 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 GANQ9H2C0 597 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 RANGRFQ9HD47 186 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 LYARQ9NX58 379 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 TREM2Q9NZC2 230 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 VSX1Q9NZR4 365 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 LUZP4Q9P127 313 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 COPZ2Q9P299 210 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ZNF639Q9UID6 485 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 GTF2A1LQ9UNN4 478 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 KCNMB2Q9Y691 235 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 FER1L6Q2WGJ9 1857 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 TCRBV3S1A0A5B6 114 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 DNASE2O00115 360 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 COPEO14579 308 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 PSTPIP1O43586 416 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 PRKAB2O43741 272 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 SORBS2O94875 1100 aaKnown RBP10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 IFNA7P01567 189 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 OPN1MWP04001 364 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 SERPINF2P08697 491 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 OPN1MW2P0DN77 364 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 OPN1MW3P0DN78 364 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 HTR1BP28222 390 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 LAP3P28838 519 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 PDHA2P29803 388 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ADSSP30520 456 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 GJA5P36382 358 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 PREPP48147 710 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 RGS19P49795 217 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 LIG4P49917 911 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 AQP5P55064 265 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 SLC3A1Q07837 685 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 LLGL1Q15334 1064 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 ETFDHQ16134 617 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 RNF212Q495C1 297 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 MINDY4Q4G0A6 757 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 MORN1Q5T089 497 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 NXNL2Q5VZ03 156 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 LIN54Q6MZP7 749 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 NOTUMQ6P988 496 aa10.7□□□□□ -0.7
PDLIM5-210ENST00000508216 CLEC2AQ6UVW9 174 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms