RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 G6PC3Q9BUM1 346 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 BRD8Q9H0E9 1235 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 EPB41L4BQ9H329 900 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 PRDM13Q9H4Q3 707 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 SAYSD1Q9NPB0 183 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 CD93Q9NPY3 652 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 TMEM30AQ9NV96 361 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 MID2Q9UJV3 735 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 C19orf53Q9UNZ5 99 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 NAALADL1Q9UQQ1 740 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ASB1Q9Y576 335 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 DOCK4Q8N1I0 1966 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ATG2AQ2TAZ0 1938 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 LRRD1A4D1F6 860 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 LINC01553A4QN01 128 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 H3BNC9 293 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 PYCARD-AS1I3L0S3 204 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 APOC4-APOC2K7ER74 178 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 PGM3O95394 542 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 CXCL14O95715 111 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 BAG2O95816 211 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 APOC2P02655 101 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 CSF1P09603 554 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 CTNNB1P35222 781 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ADRA1BP35368 520 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 SNRPNP63162 240 aaKnown RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ZNF33AQ06730 810 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 IFFO1Q0D2I5 559 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 DBPQ10586 325 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 C15orf59Q2T9L4 293 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 SLC9A4Q6AI14 798 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ANGPTL8Q6UXH0 198 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 SCD5Q86SK9 330 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ELMOD1Q8N336 334 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ARFGAP2Q8N6H7 521 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 RFWD2Q8NHY2 731 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 NKD2Q969F2 451 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 RNF125Q96EQ8 232 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 PIWIL1Q96J94 861 aaKnown RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ZC3H10Q96K80 434 aaKnown RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 SNRNP25Q9BV90 132 aaKnown RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ACPTQ9BZG2 426 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 DCLK3Q9C098 648 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 ZWILCHQ9H900 591 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 PCDH18Q9HCL0 1135 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 TLR9Q9NR96 1032 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 THEGQ9P2T0 379 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 KCND3Q9UK17 655 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 HSF4Q9ULV5 492 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 YIPF1Q9Y548 306 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 HCFC2Q9Y5Z7 792 aa7.09□□□□□ -1.27
CLCN3-206ENST00000507875 NUP210Q8TEM1 1887 aaPredicted RBP7.09□□□□□ -1.27
CLCN3-206ENST00000507875 HACD1B0YJ81 288 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 PI4K2BG5E9Z4 385 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 ZW10O43264 779 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 GRAP2O75791 330 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 PIAS2O75928 621 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 GAS8O95995 478 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 ATP5F1P24539 256 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 DDX6P26196 483 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 IL1R2P27930 398 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 GDI1P31150 447 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 CCR1P32246 355 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 KCNC1P48547 511 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 CDH6P55285 790 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 CAV1Q03135 178 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 MVKQ03426 396 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 CALCOCO2Q13137 446 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 SNX1Q13596 522 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 BMPR2Q13873 1038 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 DPYSL3Q14195 570 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 ADGRE1Q14246 886 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 KCNAB1Q14722 419 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 TBCEQ15813 527 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 OTUD1Q5VV17 481 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 SCYL2Q6P3W7 929 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 MFSD7Q6UXD7 560 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 ZNF600Q6ZNG1 722 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 H1FNTQ75WM6 255 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 UNC45BQ8IWX7 931 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 SLC15A4Q8N697 577 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 ATP6V0D2Q8N8Y2 350 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 MRPL43Q8N983 215 aaKnown RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 ATAD1Q8NBU5 361 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 BCAS4Q8TDM0 211 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 DQX1Q8TE96 717 aaKnown RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 PSMG2Q969U7 264 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 C7orf26Q96N11 449 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 PEBP4Q96S96 227 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 CDCA3Q99618 268 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 SEPT5Q99719 369 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 FOXB1Q99853 325 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 C19orf43Q9BQ61 176 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 FERMT1Q9BQL6 677 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 PCDHAC1Q9H158 963 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 MMADHCQ9H3L0 296 aaPredicted RBP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 WDCPQ9H6R7 721 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLCN3-206ENST00000507875 TRPM5Q9NZQ8 1165 aa7.08□□□□□ -1.28
CLCN3-206ENST00000507875 A0A0G2JPF8 293 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms