RNA–Protein interactions for RNA: ENST00000507807.3

CLPTM1L-209, Transcript of CLPTM1 like, humanhuman

TSL 1 (best) BASIC

Gene CLPTM1L, Length 1,740 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-209ENST00000507807 MARK4Q96L34 752 aa16.22■□□□□ 0.19
CLPTM1L-209ENST00000507807 KCNA7Q96RP8 456 aa16.22■□□□□ 0.19
CLPTM1L-209ENST00000507807 FAM129BQ96TA1 746 aa16.22■□□□□ 0.19
CLPTM1L-209ENST00000507807 TUBB1Q9H4B7 451 aa16.22■□□□□ 0.19
CLPTM1L-209ENST00000507807 NSUN3Q9H649 340 aaKnown RBP16.22■□□□□ 0.19
CLPTM1L-209ENST00000507807 UTP6Q9NYH9 597 aaKnown RBP16.22■□□□□ 0.19
CLPTM1L-209ENST00000507807 SUN2Q9UH99 717 aa16.22■□□□□ 0.19
CLPTM1L-209ENST00000507807 TSR3Q9UJK0 312 aaKnown RBP16.22■□□□□ 0.19
CLPTM1L-209ENST00000507807 SGTAO43765 313 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 PRNPP04156 253 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 AOAHP28039 575 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 PRDX3P30048 256 aaKnown RBP16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 GJA4P35212 333 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 SLC25A3Q00325 362 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 RUNX3Q13761 415 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 GRM2Q14416 872 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 ZNF234Q14588 700 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 GRIN2CQ14957 1233 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 PCBP2Q15366 365 aaKnown RBP eCLIP16.21■□□□□ 0.192e-11■■■■□ 25.2
CLPTM1L-209ENST00000507807 C18orf21Q32NC0 220 aaPredicted RBP16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 KHDC1Q4VXA5 237 aaKnown RBP16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 SYVN1Q86TM6 617 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 TRAM1L1Q8N609 369 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 MAGEC3Q8TD91 643 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 PANX3Q96QZ0 392 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 RTKNQ9BST9 563 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 S1PR5Q9H228 398 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 RAD18Q9NS91 495 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 KCTD5Q9NXV2 234 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 EIF2B4Q9UI10 523 aaKnown RBP16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 PTBP2Q9UKA9 531 aaKnown RBP16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 ITM2BQ9Y287 266 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 OARD1Q9Y530 152 aa16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.21■□□□□ 0.19
CLPTM1L-209ENST00000507807 DOCK8Q8NF50 2099 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 PLXNA2O75051 1894 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 ANTXRLA6NF34 631 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 FADS2P1A8MWK0 482 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 KPNA3O00505 521 aaPredicted RBP16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 FFAR2O15552 330 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 TM7SF2O76062 418 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 CBSLP0DN79 551 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 ATP1B2P14415 290 aaPredicted RBP16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 XPAP23025 273 aaPredicted RBP16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 ITGB7P26010 798 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 CBSP35520 551 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 HERC3Q15034 1050 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 PHKG1Q16816 387 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 CPA6Q8N4T0 437 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 DDHD1Q8NEL9 900 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 RP9Q8TA86 221 aaKnown RBP16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 HMGCLL1Q8TB92 370 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 TWIST2Q8WVJ9 160 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 ARRDC3Q96B67 414 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 HGH1Q9BTY7 390 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 RIOK2Q9BVS4 552 aaKnown RBP16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 FAM126AQ9BYI3 521 aaPredicted RBP16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 CLEC1BQ9P126 229 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 PTGDR2Q9Y5Y4 395 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 KIAA1549LQ6ZVL6 1849 aa16.2■□□□□ 0.18
CLPTM1L-209ENST00000507807 A0A088AWK7 358 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 PEX11AO75192 247 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 ESRRBO95718 433 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 MLYCDO95822 493 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 OR56A5P0C7T3 313 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 THRAP10827 490 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 ITGAXP20702 1163 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 ADAM15Q13444 863 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 ELAVL3Q14576 367 aaKnown RBP16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 ERAP2Q6P179 960 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 FRA10AC1Q70Z53 315 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 SNX32Q86XE0 403 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 PHYKPLQ8IUZ5 450 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 SUGP1Q8IWZ8 645 aaKnown RBP16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 PIP4K2CQ8TBX8 421 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 WDR60Q8WVS4 1066 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 OR8D1Q8WZ84 308 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 CLPTM1LQ96KA5 538 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 ST14Q9Y5Y6 855 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 REV3LO60673 3130 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 PSMD11O00231 422 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 EIF3FO00303 357 aaPredicted RBP16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 PIP5K1BO14986 540 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 AREL1O15033 823 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 UBDO15205 165 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 RAD51BO15315 384 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 TAPBPO15533 448 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 ENTPD5O75356 428 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 MTX2O75431 263 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 MXRA7P84157 204 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 PTK2BQ14289 1009 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 TTLL9Q3SXZ7 439 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 SCUBE1Q8IWY4 988 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 ULK2Q8IYT8 1036 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 NRSN1Q8IZ57 195 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 ARHGAP24Q8N264 748 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 OR56A4Q8NGH8 313 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 COQ10AQ96MF6 247 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 ZNF382Q96SR6 550 aa16.19■□□□□ 0.18
CLPTM1L-209ENST00000507807 KXD1Q9BQD3 176 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms