RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 UPF2Q9HAU5 1272 aaKnown RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 FANCEQ9HB96 536 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 ARFGAP3Q9NP61 516 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 SLC6A20Q9NP91 592 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 TMEM51Q9NW97 253 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 SEMA5BQ9P283 1151 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 ABI3Q9P2A4 366 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 ARMCX3Q9UH62 379 aaPredicted RBP7.03□□□□□ -1.28
VCAN-207ENST00000507162 NDOR1Q9UHB4 597 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 SERTAD3Q9UJW9 196 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 FBXL4Q9UKA2 621 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 CNTN6Q9UQ52 1028 aa7.03□□□□□ -1.28
VCAN-207ENST00000507162 ANKRD12Q6UB98 2062 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 TRAV17A0A0B4J275 112 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 DYTNA2CJ06 578 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 NPIPB15A6NHN6 443 aaPredicted RBP7.02□□□□□ -1.29
VCAN-207ENST00000507162 ACTN4O43707 911 aaKnown RBP7.02□□□□□ -1.29
VCAN-207ENST00000507162 PRAMEF2O60811 474 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 RASAL1O95294 804 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 ZBTB11O95625 1053 aaPredicted RBP7.02□□□□□ -1.29
VCAN-207ENST00000507162 CPP00450 1065 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 F10P00742 488 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 CBSLP0DN79 551 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 CBSP35520 551 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 KRT9P35527 623 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 FLT3P36888 993 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 GCNT1Q02742 428 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 MFAP5Q13361 173 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 SLC9A5Q14940 896 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 INSCQ1MX18 579 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 PTPN20Q4JDL3 420 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 ZCWPW2Q504Y3 356 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 ZNF648Q5T619 568 aaPredicted RBP7.02□□□□□ -1.29
VCAN-207ENST00000507162 ARMC6Q6NXE6 501 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 KLHL35Q6PF15 583 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 CRTC3Q6UUV7 619 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 TRIM72Q6ZMU5 477 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 SPPL2CQ8IUH8 684 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 TMEM151BQ8IW70 566 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 DMRTC2Q8IXT2 367 aaPredicted RBP7.02□□□□□ -1.29
VCAN-207ENST00000507162 RTL3Q8N8U3 475 aaKnown RBP7.02□□□□□ -1.29
VCAN-207ENST00000507162 ANKRD20A12PQ8NF67 263 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 LMO3Q8TAP4 145 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 CELF6Q96J87 481 aaKnown RBP7.02□□□□□ -1.29
VCAN-207ENST00000507162 NSMCE3Q96MG7 304 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 PPM1MQ96MI6 270 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 PWWP2AQ96N64 755 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 LMF1Q96S06 567 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 DPH2Q9BQC3 489 aaPredicted RBP7.02□□□□□ -1.29
VCAN-207ENST00000507162 UCK2Q9BZX2 261 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 RMI1Q9H9A7 625 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 PLCB1Q9NQ66 1216 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 SAMSN1Q9NSI8 373 aaKnown RBP7.02□□□□□ -1.29
VCAN-207ENST00000507162 GPATCH2LQ9NWQ4 482 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 HRASLS2Q9NWW9 162 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 COQ3Q9NZJ6 369 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 VPS18Q9P253 973 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 IFT80Q9P2H3 777 aaPredicted RBP7.02□□□□□ -1.29
VCAN-207ENST00000507162 SLC23A2Q9UGH3 650 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 KCNN3Q9UGI6 736 aa7.02□□□□□ -1.29
VCAN-207ENST00000507162 NKX2-6A6NCS4 301 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 SLC9B1P1A6NJY1 282 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 FAM90A27PA6NNH2 459 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 FAM227AF5H4B4 570 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 PSMD11O00231 422 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 ZNHIT1O43257 154 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 ZNF749O43361 778 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 NUAK1O60285 661 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 PRAMEF11O60813 436 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 PYGLP06737 847 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 UNGP13051 313 aaPredicted RBP7.01□□□□□ -1.29
VCAN-207ENST00000507162 BRAFP15056 766 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 ZNF8P17098 575 aaPredicted RBP7.01□□□□□ -1.29
VCAN-207ENST00000507162 SPAM1P38567 509 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 PREPP48147 710 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 ME1P48163 572 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 DRG2P55039 364 aaKnown RBP7.01□□□□□ -1.29
VCAN-207ENST00000507162 PTSQ03393 145 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 NSUN2Q08J23 767 aaKnown RBP eCLIP7.01□□□□□ -1.29
VCAN-207ENST00000507162 FOXD4L6Q3SYB3 417 aaPredicted RBP7.01□□□□□ -1.29
VCAN-207ENST00000507162 PARP15Q460N3 678 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 C2CD6Q53TS8 623 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 TRNP1Q6NT89 227 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 FOXD4L3Q6VB84 417 aaPredicted RBP7.01□□□□□ -1.29
VCAN-207ENST00000507162 CHSY3Q70JA7 882 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 ZDHHC17Q8IUH5 632 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 RBM12BQ8IXT5 1001 aaKnown RBP7.01□□□□□ -1.29
VCAN-207ENST00000507162 SMYD4Q8IYR2 804 aaPredicted RBP7.01□□□□□ -1.29
VCAN-207ENST00000507162 PYROXD2Q8N2H3 581 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 OR2Y1Q8NGV0 311 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 GOT1L1Q8NHS2 421 aaPredicted RBP7.01□□□□□ -1.29
VCAN-207ENST00000507162 TEKT4Q8WW24 435 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 C18orf8Q96DM3 657 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 RMND5BQ96G75 393 aaPredicted RBP7.01□□□□□ -1.29
VCAN-207ENST00000507162 SMIM14Q96QK8 99 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 C17orf62Q9BQA9 187 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 OR2AG1Q9H205 316 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 PDCL3Q9H2J4 239 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 C1GALT1Q9NS00 363 aa7.01□□□□□ -1.29
VCAN-207ENST00000507162 POT1Q9NUX5 634 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms