RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SLMAPQ14BN4 828 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 XKR5Q6UX68 686 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 CAPN12Q6ZSI9 719 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 KIAA0408Q6ZU52 694 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 GKN2Q86XP6 184 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 OTUD6BQ8N6M0 293 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 BEND7Q8N7W2 519 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-210ENST00000506767 OR2L2Q8NH16 312 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 GABPB2Q8TAK5 448 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-210ENST00000506767 NETO1Q8TDF5 533 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 SMYD2Q9NRG4 433 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 NLGN3Q9NZ94 848 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.64□□□□□ -0.39
TCOF1-210ENST00000506767 VPS9D1Q9Y2B5 631 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 V9GYY5 206 aaPredicted RBP12.64□□□□□ -0.39
TCOF1-210ENST00000506767 LAMA1P25391 3075 aa12.64□□□□□ -0.39
TCOF1-210ENST00000506767 KNL1Q8NG31 2342 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 COL5A1P20908 1838 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-210ENST00000506767 MGAT4DA6NG13 374 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 FAM159BA6NKW6 160 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 TRIM38O00635 465 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 TM4SF5O14894 197 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 FLRT2O43155 660 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 HAUS5O94927 633 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 AHSGP02765 367 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 F7P08709 466 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-210ENST00000506767 GSTM1P09488 218 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 OR56A5P0C7T3 313 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 VSNL1P62760 191 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 MPP1Q00013 466 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 GSTM4Q03013 218 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 INSCQ1MX18 579 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 UAP1L1Q3KQV9 507 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 PLA2G4EQ3MJ16 856 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 CTSL3PQ5NE16 218 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 UBAP2Q5T6F2 1119 aaKnown RBP12.63□□□□□ -0.39
TCOF1-210ENST00000506767 OGFOD3Q6PK18 319 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 TAF8Q7Z7C8 310 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 PIP4P1Q86T03 277 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 AMZ2Q86W34 360 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 SLC26A11Q86WA9 606 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 GSPT2Q8IYD1 628 aaKnown RBP12.63□□□□□ -0.39
TCOF1-210ENST00000506767 OR4C6Q8NH72 309 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 CCM2Q9BSQ5 444 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 MCMBPQ9BTE3 642 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 PPANQ9NQ55 473 aaKnown RBP12.63□□□□□ -0.39
TCOF1-210ENST00000506767 FBXO6Q9NRD1 293 aaPredicted RBP12.63□□□□□ -0.39
TCOF1-210ENST00000506767 KLC4Q9NSK0 619 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 SPATS2LQ9NUQ6 558 aaKnown RBP12.63□□□□□ -0.39
TCOF1-210ENST00000506767 TAAR2Q9P1P5 351 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 SLC17A6Q9P2U8 582 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 PCOLCE2Q9UKZ9 415 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 KCNK6Q9Y257 313 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 BTBD3Q9Y2F9 522 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 CRYL1Q9Y2S2 319 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 PCDHB1Q9Y5F3 818 aa12.63□□□□□ -0.39
TCOF1-210ENST00000506767 PIKFYVEQ9Y2I7 2098 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 UBA6A0AVT1 1052 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-210ENST00000506767 A6NCN8 305 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 CXorf49A8MYA2 514 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-210ENST00000506767 F8W8V4 182 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 CBFA2T3O75081 653 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 FTH1P02794 183 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 ESR1P03372 595 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 ANXA6P08133 673 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 FMO4P31512 558 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 STX2P32856 288 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 ACTR1BP42025 376 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 GRK6P43250 576 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 EIF3BP55884 814 aaKnown RBP12.62□□□□□ -0.39
TCOF1-210ENST00000506767 ACTR1AP61163 376 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 TCEA2Q15560 299 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 DEFB133Q30KQ1 61 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 C6orf132Q5T0Z8 1188 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 METRNLQ641Q3 311 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 ZNF549Q6P9A3 640 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 CNSTQ6PJW8 725 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 SLC30A9Q6PML9 568 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 WASH2PQ6VEQ5 465 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 FAM83HQ6ZRV2 1179 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-210ENST00000506767 TRMT10CQ7L0Y3 403 aaKnown RBP12.62□□□□□ -0.39
TCOF1-210ENST00000506767 EID2Q8N6I1 236 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 FAM181AQ8N9Y4 354 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 BAHD1Q8TBE0 780 aaPredicted RBP12.62□□□□□ -0.39
TCOF1-210ENST00000506767 FBF1Q8TES7 1133 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 DUSP23Q9BVJ7 150 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 PARD6BQ9BYG5 372 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 VPS37BQ9H9H4 285 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 WASH6PQ9NQA3 447 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 LATS2Q9NRM7 1088 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 NSMCE4AQ9NXX6 385 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 ZFATQ9P243 1243 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 RABGEF1Q9UJ41 708 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 GNPTGQ9UJJ9 305 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 RAB21Q9UL25 225 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 PSAT1Q9Y617 370 aa12.62□□□□□ -0.39
TCOF1-210ENST00000506767 IQCF5A8MTL0 148 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 H3BMM5 538 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 SLC30A4O14863 429 aa12.61□□□□□ -0.39
TCOF1-210ENST00000506767 FFAR2O15552 330 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms