RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SRP72O76094 671 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 PRAMEF1O95521 474 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 C9P02748 559 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 ANKRD34CP0C6C1 535 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 IDSP22304 550 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 RPL10P27635 214 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 DRG2P55039 364 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 GDF10P55107 478 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 GTF2H3Q13889 308 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 COL9A2Q14055 689 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 PRPSAP1Q14558 356 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 CLCA4Q14CN2 919 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 PARP6Q2NL67 630 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 TMEM164Q5U3C3 297 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 XKR5Q6UX68 686 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 RBM12BQ8IXT5 1001 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 OR13C4Q8NGS5 318 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 GDAP1Q8TB36 358 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 ZNF398Q8TD17 642 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 UBE2Q2Q8WVN8 375 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 NCSTNQ92542 709 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 ART4Q93070 314 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 RTP4Q96DX8 246 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 TTC25Q96NG3 672 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 TBL1YQ9BQ87 522 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 SIDT1Q9NXL6 827 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 FKBPLQ9UIM3 349 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 WDR37Q9Y2I8 494 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 B3GALT1Q9Y5Z6 326 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 SLC30A1Q9Y6M5 507 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 HELZ2Q9BYK8 2649 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 ZNF462Q96JM2 2506 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 TRBV5-4A0A0C4DH59 114 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 OR2AG2A6NM03 316 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 OR52A4PA6NMU1 304 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 EFCAB7A8K855 629 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 STMND1H3BQB6 276 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 H7C0S8 307 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 METTL18O95568 372 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 CRTAMO95727 393 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 VIPP01282 170 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 PRB1P04280 392 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 VCLP18206 1134 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 WT1P19544 449 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 PSMA3P25788 255 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 CAPZBP47756 277 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 GFERP55789 205 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 RAB15P59190 212 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 PDE1BQ01064 536 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 MC2RQ01718 297 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 GPR18Q14330 331 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 SPARCL1Q14515 664 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 OASLQ15646 514 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 SEPT7Q16181 437 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 BCL7AQ4VC05 210 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 METRNLQ641Q3 311 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 TMEM220Q6QAJ8 160 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 FAM83HQ6ZRV2 1179 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 ARHGEF18Q6ZSZ5 1173 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 AMZ2Q86W34 360 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 PLXDC1Q8IUK5 500 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 TRIM48Q8IWZ4 208 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 FAM71DQ8N9W8 422 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 CCDC112Q8NEF3 446 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 ZNF514Q96K75 400 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 LINC00615Q96LM1 132 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 TEFMQ96QE5 360 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 ASPSCR1Q9BZE9 553 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 RAB33BQ9H082 229 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 ASB8Q9H765 288 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 FBXO8Q9NRD0 319 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 SLC39A1Q9NY26 324 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 EPHA6Q9UF33 1036 aa8.9□□□□□ -0.98
PDLIM5-209ENST00000506632 KALRNO60229 2985 aa8.9□□□□□ -0.99
PDLIM5-209ENST00000506632 PIEZO2Q9H5I5 2752 aa8.9□□□□□ -0.99
PDLIM5-209ENST00000506632 IGLV3-16A0A075B6K0 115 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 KLHL33A6NCF5 533 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 MGAT4DA6NG13 374 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 A8MU76 341 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 TOX3O15405 576 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 KRT86O43790 486 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 UBXN7O94888 489 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 AP2A1O95782 977 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 TYRP1P17643 537 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 HADHAP40939 763 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 MAPK9P45984 424 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 GSDMDP57764 484 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 NFE2L1Q14494 772 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 RPE65Q16518 533 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 LONRF2Q1L5Z9 754 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 P3H1Q32P28 736 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 ZNF658BQ4V348 819 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 SNAP47Q5SQN1 464 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 MANEAQ5SRI9 462 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 DCAF12Q5T6F0 453 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 KIAA1614Q5VZ46 1190 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 ANKS6Q68DC2 871 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 VASH2Q86V25 355 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 FAM129CQ86XR2 697 aa8.89□□□□□ -0.99
PDLIM5-209ENST00000506632 NXPE1Q8N323 547 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms