RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 LRRC17Q8N6Y2 441 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 SLC43A3Q8NBI5 491 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 SMG7Q92540 1137 aaKnown RBP16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 CHID1Q9BWS9 393 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 ZNF214Q9UL59 606 aaPredicted RBP16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 ZBTB11O95625 1053 aaPredicted RBP16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 IFNW1P05000 195 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 SCNN1AP37088 669 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 ZNF730Q6ZMV8 503 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 GALNT5Q7Z7M9 940 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 SLCO6A1Q86UG4 719 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 GJD3Q8N144 294 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 MPP5Q8N3R9 675 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 HTATIP2Q9BUP3 242 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 SUCOQ9UBS9 1254 aaKnown RBP16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 ERVW-1Q9UQF0 538 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 FADS2P1A8MWK0 482 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 CCL22O00626 93 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 TCEA3O75764 348 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 PSMD8P48556 350 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 PTPN5P54829 565 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 ZNF280AP59817 542 aaPredicted RBP16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 RFTN1Q14699 578 aaPredicted RBP16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 RASSF5Q8WWW0 418 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 TCF25Q9BQ70 676 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 HEPHQ9BQS7 1158 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 CCDC162PA2VCL2 907 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 CHST10O43529 356 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 KHDRBS3O75525 346 aaKnown RBP16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 OR4F21O95013 312 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 OR5F1O95221 314 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 ETS2P15036 469 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 CHIT1Q13231 466 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 SIM2Q14190 667 aaPredicted RBP16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 SLC25A24Q6NUK1 477 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 TMEM138Q9NPI0 162 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 FKBPLQ9UIM3 349 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 SNX10Q9Y5X0 201 aa16.36■□□□□ 0.21
PCDHA1-203ENST00000504120 SLC38A8A6NNN8 435 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 KERAO60938 352 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 PTGES3Q15185 160 aaKnown RBP16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 UBR7Q8N806 425 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 TMEM27Q9HBJ8 222 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 GALNT8Q9NY28 637 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 CASKO14936 926 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 PIP5K1BO14986 540 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 TGFBR2P37173 567 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 CCT3P49368 545 aaKnown RBP16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 CA9Q16790 459 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 PIGWQ7Z7B1 504 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 SVOPLQ8N434 492 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 GLB1L3Q8NCI6 653 aaPredicted RBP16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 CAPSLQ8WWF8 208 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 EMID1Q96A84 441 aaPredicted RBP16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 FCRL5Q96RD9 977 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 TRMT13Q9NUP7 481 aaKnown RBP16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 ING4Q9UNL4 249 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 FCF1Q9Y324 198 aaKnown RBP16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 IRAK3Q9Y616 596 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 KRT33AO76009 404 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 EPHX1P07099 455 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 TCEAL5Q5H9L2 206 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 C6orf52Q5T4I8 152 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 RTL4Q6ZR62 310 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 CIR1Q86X95 450 aaPredicted RBP16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 UNC5BQ8IZJ1 945 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 SLCO2A1Q92959 643 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 NECTIN3Q9NQS3 549 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 SH3GLB1Q9Y371 365 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 OR2AG2A6NM03 316 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 ADAMDEC1O15204 470 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 NSG1P42857 185 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 TAS2R39P59534 338 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 NDUFA9Q16795 377 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 PSRC1Q6PGN9 363 aaPredicted RBP16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 PAOXQ6QHF9 649 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 GALNT13Q8IUC8 556 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 PARP8Q8N3A8 854 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 LIX1Q8N485 282 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 SLAIN1Q8ND83 568 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 SLC35B2Q8TB61 432 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 FAM81AQ8TBF8 368 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 EQTNQ9NQ60 294 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 RASSF1Q9NS23 344 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 CPQQ9Y646 472 aa16.35■□□□□ 0.21
PCDHA1-203ENST00000504120 SLIT2O94813 1529 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 TMEM88BA6NKF7 163 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 MPZL2O60487 215 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 MAPK12P53778 367 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 LPIN1Q14693 890 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 HKDC1Q2TB90 917 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 CFAP206Q8IYR0 622 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 GPR135Q8IZ08 494 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 SIDT2Q8NBJ9 832 aaKnown RBP16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 ZNF563Q8TA94 476 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 C1GALT1C1Q96EU7 318 aa16.34■□□□□ 0.21
PCDHA1-203ENST00000504120 ETAA1Q9NY74 926 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms