RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 UBE2IP63279 158 aaKnown RBP11.75□□□□□ -0.53
MED28-203ENST00000503945 CYP4F2P78329 520 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 PDE1BQ01064 536 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 KIF5AQ12840 1032 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 TAF1AQ15573 450 aaPredicted RBP11.75□□□□□ -0.53
MED28-203ENST00000503945 TBR1Q16650 682 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 LONRF2Q1L5Z9 754 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 ANKS6Q68DC2 871 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 PEX26Q7Z412 305 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 SYCE1Q8N0S2 351 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 UBL4BQ8N7F7 174 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 BEND7Q8N7W2 519 aaPredicted RBP11.75□□□□□ -0.53
MED28-203ENST00000503945 RASGEF1AQ8N9B8 481 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 ZDHHC12Q96GR4 267 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 ZNF514Q96K75 400 aaPredicted RBP11.75□□□□□ -0.53
MED28-203ENST00000503945 FICDQ9BVA6 458 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 LACRTQ9GZZ8 138 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 GBA3Q9H227 469 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 SDK2Q58EX2 2172 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 BOD1L1Q8NFC6 3051 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 BSNQ9UPA5 3926 aa11.75□□□□□ -0.53
MED28-203ENST00000503945 LILRA5A6NI73 299 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 TERTO14746 1132 aaKnown RBP11.74□□□□□ -0.53
MED28-203ENST00000503945 TOX3O15405 576 aaPredicted RBP11.74□□□□□ -0.53
MED28-203ENST00000503945 CAPN5O15484 640 aaPredicted RBP11.74□□□□□ -0.53
MED28-203ENST00000503945 PJA2O43164 708 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 CRTAMO95727 393 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 PYGMP11217 842 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 FECHP22830 423 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 PTPN7P35236 360 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 VAV2P52735 878 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 CLCA4Q14CN2 919 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 KHDC1Q4VXA5 237 aaKnown RBP11.74□□□□□ -0.53
MED28-203ENST00000503945 RAD9BQ6WBX8 426 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 CACNA2D3Q8IZS8 1091 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 BMPERQ8N8U9 685 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 TTC13Q8NBP0 860 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 OR4K2Q8NGD2 314 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 RTP4Q96DX8 246 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 C9orf72Q96LT7 481 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 CTRCQ99895 268 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 TRIT1Q9H3H1 467 aaKnown RBP11.74□□□□□ -0.53
MED28-203ENST00000503945 ASB8Q9H765 288 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 POT1Q9NUX5 634 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 PCDHGA4Q9Y5G9 962 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 ARL5AQ9Y689 179 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 SLC30A1Q9Y6M5 507 aa11.74□□□□□ -0.53
MED28-203ENST00000503945 ZFC3H1O60293 1989 aaKnown RBP11.74□□□□□ -0.53
MED28-203ENST00000503945 KLHL33A6NCF5 533 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 OR2AG2A6NM03 316 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 OR52A4PA6NMU1 304 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 RASSF9O75901 435 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 SPTA1P02549 2419 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 C9P02748 559 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 RALBP11234 206 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 BRAFP15056 766 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 AKT1P31749 480 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 ARSDP51689 593 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 FOXM1Q08050 763 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 PTPRCAPQ14761 206 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 PARP6Q2NL67 630 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 COLEC12Q5KU26 742 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 FNBP1LQ5T0N5 605 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 GPRC6AQ5T6X5 926 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 METRNLQ641Q3 311 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 KLHL35Q6PF15 583 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 ATG14Q6ZNE5 492 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 C11orf96Q7Z7L8 435 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 NLGN4XQ8N0W4 816 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 LRRC57Q8N9N7 239 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 DDHD1Q8NEL9 900 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 NLGN4YQ8NFZ3 816 aaPredicted RBP11.73□□□□□ -0.53
MED28-203ENST00000503945 CCDC110Q8TBZ0 833 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 PMEPA1Q969W9 287 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 KIAA1143Q96AT1 154 aaPredicted RBP11.73□□□□□ -0.53
MED28-203ENST00000503945 DCUN1D1Q96GG9 259 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 SPATA13Q96N96 652 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 TGM7Q96PF1 710 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 APOL2Q9BQE5 337 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 EFHD1Q9BUP0 239 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 IMPACTQ9P2X3 320 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 FEZ2Q9UHY8 353 aaPredicted RBP11.73□□□□□ -0.53
MED28-203ENST00000503945 PILRAQ9UKJ1 303 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 ACSL5Q9ULC5 683 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 WDR37Q9Y2I8 494 aa11.73□□□□□ -0.53
MED28-203ENST00000503945 REXO2Q9Y3B8 237 aaKnown RBP11.73□□□□□ -0.53
MED28-203ENST00000503945 GRID2IPA4D2P6 1211 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 PRR19A6NJB7 356 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 MIF4GDA9UHW6 222 aaKnown RBP11.72□□□□□ -0.53
MED28-203ENST00000503945 PSMD3O43242 534 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 RAD1O60671 282 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 SRP72O76094 671 aaKnown RBP11.72□□□□□ -0.53
MED28-203ENST00000503945 PRAMEF1O95521 474 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 ANKRD34CP0C6C1 535 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 PSMB4P28070 264 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 ADRA1AP35348 466 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 HADHAP40939 763 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 SEPHS1P49903 392 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 CTSCP53634 463 aa11.72□□□□□ -0.53
MED28-203ENST00000503945 DMPKQ09013 629 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms