RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 GFM1Q96RP9 751 aaKnown RBP17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 KRT12Q99456 494 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 TTC1Q99614 292 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 CPNE7Q9UBL6 633 aa17.9■□□□□ 0.46
PDLIM7-209ENST00000503346 C17orf113A0A1B0GUU1 675 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 D6RAR5 112 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 TTI1O43156 1089 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 CSO75390 466 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 XRCC1P18887 633 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 ARNTP27540 789 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 RPL10P27635 214 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 PBLDP30039 288 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 DRG2P55039 364 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 OR1D5P58170 312 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 SEPT7Q16181 437 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 CLPPQ16740 277 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 ISXQ2M1V0 245 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 AARS2Q5JTZ9 985 aaKnown RBP17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 IZUMO3Q5VZ72 239 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 XKR5Q6UX68 686 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 CLDN19Q8N6F1 224 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 HM13Q8TCT9 377 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 SH3KBP1Q96B97 665 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 SYNDIG1Q9H7V2 258 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 VPS37BQ9H9H4 285 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 UCK1Q9HA47 277 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 CATSPERZQ9NTU4 200 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 POT1Q9NUX5 634 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 SAMD15Q9P1V8 674 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 ZNF624Q9P2J8 865 aaPredicted RBP17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 WDR37Q9Y2I8 494 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 PLXNB3Q9ULL4 1909 aa17.89■□□□□ 0.45
PDLIM7-209ENST00000503346 FAM237BA0A1B0GVD1 139 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 QSOX1O00391 747 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 GSTM1P09488 218 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 ALDH4A1P30038 563 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 PPARGP37231 505 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 SLC19A1P41440 591 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 PDX1P52945 283 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 GSTM4Q03013 218 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 SQSTM1Q13501 440 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 SEMA3AQ14563 771 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 ZNF658BQ4V348 819 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 KIAA0930Q6ICG6 404 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 CASC4Q6P4E1 433 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 CES3Q6UWW8 571 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 UNQ6494/PRO21346Q6UXR6 183 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 ZNF572Q7Z3I7 529 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 TMEM135Q86UB9 458 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 AGGF1Q8N302 714 aaeCLIP17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 TRIM44Q96DX7 344 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 SIGLEC10Q96LC7 697 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 SLC38A3Q99624 504 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 TRIM51Q9BSJ1 452 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 CCM2Q9BSQ5 444 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 MARCH4Q9P2E8 410 aaPredicted RBP17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 ACSL5Q9ULC5 683 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 PRSS21Q9Y6M0 314 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 ASXL3Q9C0F0 2248 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 PTPRBP23467 1997 aa17.88■□□□□ 0.45
PDLIM7-209ENST00000503346 ARHGEF17Q96PE2 2063 aaPredicted RBP17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 IGHV1OR21-1A0A087WYE8 117 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 TRABD2BA6NFA1 517 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 C1QTNF9BB2RNN3 333 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 SMAPO00193 183 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 CD3EAPO15446 510 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 VAPBO95292 243 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 TUBB4AP04350 444 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 C1QTNF9P0C862 333 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 PAMP19021 973 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 CD1CP29017 333 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 HALP42357 657 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 ARCN1P48444 511 aaKnown RBP17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 GPLD1P80108 840 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 CLCA4Q14CN2 919 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 MORF4L2Q15014 288 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 ANKRD20A4Q4UJ75 823 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 NRSN2Q9GZP1 204 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 KCNK4Q9NYG8 393 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 ANAPC5Q9UJX4 755 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 PCDHB1Q9Y5F3 818 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 ENTPD2Q9Y5L3 495 aa17.87■□□□□ 0.45
PDLIM7-209ENST00000503346 FAM187AA6NFU0 413 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 LILRA5A6NI73 299 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 OR52A4PA6NMU1 304 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 OR1I1O60431 355 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 SEC31AO94979 1220 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 CPNE6O95741 557 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 VIPP01282 170 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 TTPAP49638 278 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 EPHA4P54764 986 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 RTP5Q14D33 572 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 AMZ1Q400G9 498 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 HIBCHQ6NVY1 386 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 MAATS1Q7Z4T9 603 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 ZNF761Q86XN6 746 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 TRIM48Q8IWZ4 208 aa17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 RBM12BQ8IXT5 1001 aaKnown RBP17.86■□□□□ 0.45
PDLIM7-209ENST00000503346 CFAP206Q8IYR0 622 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms