RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SEPHS1P49903 392 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 ATP1A2P50993 1020 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 GEMP55040 296 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 SH3BP2P78314 561 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 GTF2H3Q13889 308 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 NFE2L1Q14494 772 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 DENND5AQ6IQ26 1287 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 DARS2Q6PI48 645 aaKnown RBP15.95■□□□□ 0.14
SCLT1-204ENST00000503215 XKR5Q6UX68 686 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 AMZ2Q86W34 360 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 TMEM139Q8IV31 216 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 DDHD1Q8NEL9 900 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 OR4K2Q8NGD2 314 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 DTX3LQ8TDB6 740 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 BRSK1Q8TDC3 778 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 TTC25Q96NG3 672 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 LUC7LQ9NQ29 371 aaKnown RBP15.95■□□□□ 0.14
SCLT1-204ENST00000503215 FKBPLQ9UIM3 349 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 PACSIN2Q9UNF0 486 aaPredicted RBP15.95■□□□□ 0.14
SCLT1-204ENST00000503215 EFR3BQ9Y2G0 817 aa15.95■□□□□ 0.14
SCLT1-204ENST00000503215 CFAP20Q9Y6A4 193 aaKnown RBP15.95■□□□□ 0.14
SCLT1-204ENST00000503215 LOC101059948A0A1B0GTJ6 334 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 BTNL10A8MVZ5 291 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 B8ZZF3 427 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 ANXA9O76027 345 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 PRAMEF1O95521 474 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 ITGB2P05107 769 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 ZNF28P17035 718 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 ITGB6P18564 788 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 VAV2P52735 878 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 RWDD2BP57060 319 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 RAB15P59190 212 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 NFKB2Q00653 900 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 RPE65Q16518 533 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 LDLRAP1Q5SW96 308 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 FNBP1LQ5T0N5 605 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 ZDHHC20Q5W0Z9 365 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 FAM92BQ6ZTR7 304 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 CDKL3Q8IVW4 592 aaPredicted RBP15.94■□□□□ 0.14
SCLT1-204ENST00000503215 AVL9Q8NBF6 648 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 CXorf40BQ96DE9 158 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 DESI2Q9BSY9 194 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 EPB41L1Q9H4G0 881 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 FAM96AQ9H5X1 160 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 IL17BQ9UHF5 180 aa15.94■□□□□ 0.14
SCLT1-204ENST00000503215 TLN1Q9Y490 2541 aaKnown RBP15.93■□□□□ 0.14
SCLT1-204ENST00000503215 TCRBV7S2A1N4TA0A589 114 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 CCDC66A2RUB6 948 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 POLR1CO15160 346 aaPredicted RBP15.93■□□□□ 0.14
SCLT1-204ENST00000503215 NKX2-8O15522 239 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 SGTAO43765 313 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 STK17BO94768 372 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 ANKRD34CP0C6C1 535 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 LPOP22079 712 aaPredicted RBP15.93■□□□□ 0.14
SCLT1-204ENST00000503215 TMPRSS15P98073 1019 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 XIAPP98170 497 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 FOXM1Q08050 763 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 DMPKQ09013 629 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 NFATC3Q12968 1075 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 TAF1AQ15573 450 aaPredicted RBP15.93■□□□□ 0.14
SCLT1-204ENST00000503215 ITPRIPL1Q6GPH6 555 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 CEACAM20Q6UY09 585 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 LILRA3Q8N6C8 439 aaPredicted RBP15.93■□□□□ 0.14
SCLT1-204ENST00000503215 ZSCAN1Q8NBB4 408 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 SPDYE1Q8NFV5 336 aaPredicted RBP15.93■□□□□ 0.14
SCLT1-204ENST00000503215 OR13C4Q8NGS5 318 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 ELMO2Q96JJ3 720 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 SPATA13Q96N96 652 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 POT1Q9NUX5 634 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 SMOXQ9NWM0 555 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 FAM8A1Q9UBU6 413 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 R3HDM2Q9Y2K5 976 aaKnown RBP15.93■□□□□ 0.14
SCLT1-204ENST00000503215 SPTA1P02549 2419 aa15.93■□□□□ 0.14
SCLT1-204ENST00000503215 SRP72O76094 671 aaKnown RBP15.92■□□□□ 0.14
SCLT1-204ENST00000503215 FTCDO95954 541 aa15.92■□□□□ 0.14
SCLT1-204ENST00000503215 VCLP18206 1134 aa15.92■□□□□ 0.14
SCLT1-204ENST00000503215 ITGA9Q13797 1035 aa15.92■□□□□ 0.14
SCLT1-204ENST00000503215 DUS1LQ6P1R4 473 aaKnown RBP15.92■□□□□ 0.14
SCLT1-204ENST00000503215 KIAA1328Q86T90 577 aa15.92■□□□□ 0.14
SCLT1-204ENST00000503215 NLGN4XQ8N0W4 816 aa15.92■□□□□ 0.14
SCLT1-204ENST00000503215 NLGN4YQ8NFZ3 816 aaPredicted RBP15.92■□□□□ 0.14
SCLT1-204ENST00000503215 TEFMQ96QE5 360 aaKnown RBP15.92■□□□□ 0.14
SCLT1-204ENST00000503215 INSM2Q96T92 566 aaPredicted RBP15.92■□□□□ 0.14
SCLT1-204ENST00000503215 BAG1Q99933 345 aaPredicted RBP15.92■□□□□ 0.14
SCLT1-204ENST00000503215 ARHGAP9Q9BRR9 750 aa15.92■□□□□ 0.14
SCLT1-204ENST00000503215 ASB8Q9H765 288 aa15.92■□□□□ 0.14
SCLT1-204ENST00000503215 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.92■□□□□ 0.14
SCLT1-204ENST00000503215 TMEM184BQ9Y519 407 aaPredicted RBP15.92■□□□□ 0.14
SCLT1-204ENST00000503215 C5orf60A6NFR6 353 aa15.91■□□□□ 0.14
SCLT1-204ENST00000503215 DDX3YO15523 660 aaKnown RBP15.91■□□□□ 0.14
SCLT1-204ENST00000503215 RASSF9O75901 435 aa15.91■□□□□ 0.14
SCLT1-204ENST00000503215 TJP3O95049 919 aa15.91■□□□□ 0.14
SCLT1-204ENST00000503215 IPO7O95373 1038 aaKnown RBP15.91■□□□□ 0.14
SCLT1-204ENST00000503215 METTL18O95568 372 aa15.91■□□□□ 0.14
SCLT1-204ENST00000503215 DLGAP3O95886 979 aa15.91■□□□□ 0.14
SCLT1-204ENST00000503215 TPH1P17752 444 aa15.91■□□□□ 0.14
SCLT1-204ENST00000503215 MSH3P20585 1137 aa15.91■□□□□ 0.14
SCLT1-204ENST00000503215 F8A1P23610 371 aa15.91■□□□□ 0.14
SCLT1-204ENST00000503215 AKT1P31749 480 aa15.91■□□□□ 0.14
SCLT1-204ENST00000503215 CAPZBP47756 277 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms