RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 A0A0J9YYE9 177 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 LRRC14BA6NHZ5 514 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 HIDE1A8MVS5 230 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 CDC7O00311 574 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 AIM2O14862 343 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 LSM1O15116 133 aaKnown RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 ECI2O75521 394 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 ZNF821O75541 412 aaPredicted RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 SNX4O95219 450 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 TRBC1P01850 177 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 ESR1P03372 595 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 PBLDP30039 288 aaPredicted RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 GCKP35557 465 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 ADARP55265 1226 aaKnown RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 SLC34A1Q06495 639 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 TBL3Q12788 808 aaKnown RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 TUBA3CQ13748 450 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 TSNQ15631 228 aaKnown RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 DGKKQ5KSL6 1271 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 PLPP4Q5VZY2 271 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 CLEC6AQ6EIG7 209 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 CMTM8Q8IZV2 173 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 FBXO39Q8N4B4 442 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 LSMEM1Q8N8F7 131 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 SIDT2Q8NBJ9 832 aaKnown RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 CD200R1Q8TD46 325 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 DTX3LQ8TDB6 740 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 KCNJ9Q92806 393 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.45□□□□□ -0.58
USP46-204ENST00000503060 LBHD1Q9BQE6 289 aaPredicted RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 TRIM4Q9C037 500 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 TNKS2Q9H2K2 1166 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 CXXC1Q9P0U4 656 aaPredicted RBP11.45□□□□□ -0.58
USP46-204ENST00000503060 MCM8Q9UJA3 840 aa11.45□□□□□ -0.58
USP46-204ENST00000503060 GBF1Q92538 1859 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 NPEPPSL1A6NEC2 478 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 GPR39O43194 453 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 TBX10O75333 385 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 PDE5AO76074 875 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 CDK14O94921 469 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 TSPAN12O95859 305 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 BMP1P13497 986 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 HTR3AP46098 478 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 PPIGQ13427 754 aaKnown RBP eCLIP11.44□□□□□ -0.58
USP46-204ENST00000503060 PITRM1Q5JRX3 1037 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 CORO6Q6QEF8 472 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 CLYBLQ8N0X4 340 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 KYQ8NBH2 561 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 PPP1R14BQ96C90 147 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 TCEAL4Q96EI5 215 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 ANKRD27Q96NW4 1050 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 P2RY12Q9H244 342 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 ATP13A3Q9H7F0 1226 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 ZFYVE1Q9HBF4 777 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 CCL26Q9Y258 94 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 TMED5Q9Y3A6 229 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 C1orf232A0A0U1RR37 186 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 SYCE1LA8MT33 242 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 FGF4P08620 206 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 SRCP12931 536 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 ARSAP15289 507 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 CHRM3P20309 590 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 CAPN3P20807 821 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 HNF1BP35680 557 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 CTSOP43234 321 aaPredicted RBP11.44□□□□□ -0.58
USP46-204ENST00000503060 NUDT2P50583 147 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 EPHA5P54756 1037 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 IL2P60568 153 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 SH3BP2P78314 561 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 CDKN3Q16667 212 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 TLDC1Q6P9B6 456 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 C16orf89Q6UX73 402 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 CERS6Q6ZMG9 384 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 MRPL43Q8N983 215 aaKnown RBP11.44□□□□□ -0.58
USP46-204ENST00000503060 OR2AP1Q8NGE2 309 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 SP7Q8TDD2 431 aaPredicted RBP11.44□□□□□ -0.58
USP46-204ENST00000503060 FUBP1Q96AE4 644 aaKnown RBP11.44□□□□□ -0.58
USP46-204ENST00000503060 RCN3Q96D15 328 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 LINGO1Q96FE5 620 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 CNDP2Q96KP4 475 aaKnown RBP11.44□□□□□ -0.58
USP46-204ENST00000503060 C19orf43Q9BQ61 176 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 DNAAF2Q9NVR5 837 aaKnown RBP11.44□□□□□ -0.58
USP46-204ENST00000503060 DGKBQ9Y6T7 804 aa11.44□□□□□ -0.58
USP46-204ENST00000503060 CXorf51AA0A1B0GTR3 108 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 E5RI56 91 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 BTN3A1O00481 513 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 PPP6CO00743 305 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 GAPDHSO14556 408 aaPredicted RBP11.43□□□□□ -0.58
USP46-204ENST00000503060 PRMT5O14744 637 aaPredicted RBP11.43□□□□□ -0.58
USP46-204ENST00000503060 UBDO15205 165 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 SORBS2O94875 1100 aaKnown RBP11.43□□□□□ -0.58
USP46-204ENST00000503060 SERPINA4P29622 427 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 EEF1DP29692 281 aaKnown RBP11.43□□□□□ -0.58
USP46-204ENST00000503060 CTNNB1P35222 781 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 BMPR1AP36894 532 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 MAN2A2P49641 1150 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 STK19P49842 368 aaPredicted RBP11.43□□□□□ -0.58
USP46-204ENST00000503060 SQLEQ14534 574 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 TEAD2Q15562 447 aa11.43□□□□□ -0.58
USP46-204ENST00000503060 PPP1R3AQ16821 1122 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms