RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 KCNA4P22459 653 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 TTPAP49638 278 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 SLC7A5Q01650 507 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 CRYMQ14894 314 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 TYSND1Q2T9J0 566 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 NEPROQ6NW34 567 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 IYDQ6PHW0 289 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 LDB1Q86U70 411 aaPredicted RBP24.68■■□□□ 1.54
LSM6-202ENST00000502781 OR6C4Q8NGE1 309 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 PATE1Q8WXA2 126 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 NAT6Q93015 286 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 PRDM8Q9NQV8 689 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 DNAJC16Q9Y2G8 782 aa24.68■■□□□ 1.54
LSM6-202ENST00000502781 C17orf113A0A1B0GUU1 675 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 GOLGA8KD6RF30 607 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 GOLGA8TH3BQL2 631 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 QSOX1O00391 747 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 CDK4P11802 303 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 ELK3P41970 407 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 CAV1Q03135 178 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 LONRF1Q17RB8 773 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 GLE1Q53GS7 698 aaKnown RBP24.67■■□□□ 1.54
LSM6-202ENST00000502781 AGAP9Q5VTM2 703 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 MRNIPQ6NTE8 343 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 ABRAXAS1Q6UWZ7 409 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 ZDHHC24Q6UX98 284 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 FAM83HQ6ZRV2 1179 aaPredicted RBP24.67■■□□□ 1.54
LSM6-202ENST00000502781 ERMP1Q7Z2K6 904 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 ARL14Q8N4G2 192 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.67■■□□□ 1.54
LSM6-202ENST00000502781 ADAMTS14Q8WXS8 1223 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 TCF12Q99081 682 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 CPED1A4D0V7 1026 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 NUDT21O43809 227 aaKnown RBP24.67■■□□□ 1.54
LSM6-202ENST00000502781 TRIM16O95361 564 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 GLB1P16278 677 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 OGNP20774 298 aaKnown RBP24.67■■□□□ 1.54
LSM6-202ENST00000502781 IDSP22304 550 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 MAZP56270 477 aaKnown RBP24.67■■□□□ 1.54
LSM6-202ENST00000502781 NFE2L1Q14494 772 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 SPANXN3Q5MJ09 141 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 PERM1Q5SV97 790 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 METRNLQ641Q3 311 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 STEAP4Q687X5 459 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 EFL1Q7Z2Z2 1120 aaKnown RBP24.67■■□□□ 1.54
LSM6-202ENST00000502781 CILP2Q8IUL8 1156 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 IFI44Q8TCB0 444 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 CARD6Q9BX69 1037 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 PHACTR1Q9C0D0 580 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 OSGEPL1Q9H4B0 414 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 IL1RAPL1Q9NZN1 696 aa24.67■■□□□ 1.54
LSM6-202ENST00000502781 DMGDHQ9UI17 866 aaKnown RBP24.67■■□□□ 1.54
LSM6-202ENST00000502781 OR5K4A6NMS3 321 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 PRMT5O14744 637 aaPredicted RBP24.66■■□□□ 1.54
LSM6-202ENST00000502781 GSTM1P09488 218 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 SLC2A4P14672 509 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 BRAFP15056 766 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 PNLIPP16233 465 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 FASLGP48023 281 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 PLTPP55058 493 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 GSTM4Q03013 218 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 PDIA2Q13087 525 aaKnown RBP24.66■■□□□ 1.54
LSM6-202ENST00000502781 CENPUQ71F23 418 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 ZNF438Q7Z4V0 828 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 SDCCAG8Q86SQ7 713 aaPredicted RBP24.66■■□□□ 1.54
LSM6-202ENST00000502781 LMNTD2Q8IXW0 634 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 FBXO25Q8TCJ0 367 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 HM13Q8TCT9 377 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 SLC37A2Q8TED4 501 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 CCM2Q9BSQ5 444 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 P2RY12Q9H244 342 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 SCHIP1Q9P0W5 487 aaPredicted RBP24.66■■□□□ 1.54
LSM6-202ENST00000502781 CHMP2BQ9UQN3 213 aa24.66■■□□□ 1.54
LSM6-202ENST00000502781 NCOR2Q9Y618 2525 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 KIR2DS5A0A0G2JLQ3 304 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 A0A0G2JNG1 304 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 ESYT3A0FGR9 886 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 ESPNB1AK53 854 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 KIR2DS3K7RE56 304 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 EIF3HO15372 352 aaKnown RBP eCLIP24.65■■□□□ 1.54
LSM6-202ENST00000502781 SNX2O60749 519 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 RPS3P23396 243 aaKnown RBP eCLIP24.65■■□□□ 1.54
LSM6-202ENST00000502781 PMLP29590 882 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 ADARP55265 1226 aaKnown RBP24.65■■□□□ 1.54
LSM6-202ENST00000502781 KIR2DS5Q14953 304 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 NR1D2Q14995 579 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 FASTKD3Q14CZ7 662 aaKnown RBP24.65■■□□□ 1.54
LSM6-202ENST00000502781 UNC5AQ6ZN44 842 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 RAB44Q7Z6P3 723 aaPredicted RBP24.65■■□□□ 1.54
LSM6-202ENST00000502781 VPS37BQ9H9H4 285 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 ZC3H7BQ9UGR2 993 aaKnown RBP24.65■■□□□ 1.54
LSM6-202ENST00000502781 RABGEF1Q9UJ41 708 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 RNF215Q9Y6U7 377 aa24.65■■□□□ 1.54
LSM6-202ENST00000502781 RP1P56715 2156 aa24.64■■□□□ 1.54
LSM6-202ENST00000502781 ADRB1P08588 477 aa24.64■■□□□ 1.53
LSM6-202ENST00000502781 OR56A5P0C7T3 313 aa24.64■■□□□ 1.53
LSM6-202ENST00000502781 RPL10P27635 214 aaKnown RBP24.64■■□□□ 1.53
LSM6-202ENST00000502781 PBLDP30039 288 aaPredicted RBP24.64■■□□□ 1.53
LSM6-202ENST00000502781 E2F1Q01094 437 aa24.64■■□□□ 1.53
LSM6-202ENST00000502781 GUCY2DQ02846 1103 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms