RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 TMEM186Q96B77 213 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 ARHGEF26Q96DR7 871 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 CFAP36Q96G28 342 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 MARS2Q96GW9 593 aaKnown RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 DCLRE1CQ96SD1 692 aaKnown RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 H2AFJQ9BTM1 129 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 DPCDQ9BVM2 203 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 ELOVL1Q9BW60 279 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 VN1R3Q9BXE9 311 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 GPR87Q9BY21 358 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 RIBC2Q9H4K1 309 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 MINDY3Q9H8M7 445 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 SAP30LQ9HAJ7 183 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 UPF2Q9HAU5 1272 aaKnown RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 TRPV5Q9NQA5 729 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 DDX4Q9NQI0 724 aaKnown RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 FAM212BQ9NTI7 297 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 UTP6Q9NYH9 597 aaKnown RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 NKX1-2Q9UD57 310 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 SUN2Q9UH99 717 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 TLK1Q9UKI8 766 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 MTUS1Q9ULD2 1270 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 CCPG1Q9ULG6 757 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 VPS4AQ9UN37 437 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 GABRQQ9UN88 632 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 NOX1Q9Y5S8 564 aa4.3□□□□□ -1.72
HMGB1P21-201ENST00000502313 CARMIL3Q8ND23 1372 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 A0A0B4J293 547 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 LNP1A1A4G5 178 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZSCAN5BA6NJL1 495 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 DIRC3C9JPN6 131 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 USP17L23D6RBM5 183 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 H3BQ06 376 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 HCRTR2O43614 444 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 TRIAP1O43715 76 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 NEMFO60524 1076 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ERLIN1O75477 346 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLC16A8O95907 504 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 PAHP00439 452 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 RLN1P04808 185 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 HEXAP06865 529 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 PKMP14618 531 aaKnown RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 GLRA2P23416 452 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 NR2F2P24468 414 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 CLCNKBP51801 687 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 PRELPP51888 382 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 PTENP60484 403 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 UBE2HP62256 183 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 IRX3P78415 501 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 HSD11B2P80365 405 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ADORA2A-AS1P86434 159 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 MC2RQ01718 297 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 CXCL9Q07325 125 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 OVGP1Q12889 678 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 GPM6BQ13491 265 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 GPR162Q16538 588 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 CYP2A13Q16696 494 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 CCDC142Q17RM4 750 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZXDCQ2QGD7 858 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 CFAP221Q4G0U5 840 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 XKR9Q5GH70 373 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 RARS2Q5T160 578 aaKnown RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 LRIF1Q5T3J3 769 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 SERTAD4-AS1Q5TG53 156 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 STRIP1Q5VSL9 837 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 PRAMEF8Q5VWM4 474 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 TXNDC8Q6A555 127 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 SFRP4Q6FHJ7 346 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLC27A1Q6PCB7 646 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 PSRC1Q6PGN9 363 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 AFTPHQ6ULP2 937 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 WDR88Q6ZMY6 472 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 TMEM182Q6ZP80 229 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 MTSS1LQ765P7 747 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ABI3BPQ7Z7G0 1075 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 CUZD1Q86UP6 607 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ADIPOR2Q86V24 386 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 CAND1Q86VP6 1230 aaKnown RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 SPATA2LQ8IUW3 424 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 CCDC83Q8IWF9 413 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 GHDCQ8N2G8 530 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZCCHC7Q8N3Z6 543 aaKnown RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 DRAXINQ8NBI3 349 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 TP53I13Q8NBR0 393 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 DNAAF1Q8NEP3 725 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 OR2T34Q8NGX1 318 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 FAM110DQ8TAY7 271 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ZNF483Q8TF39 744 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 SNX19Q92543 992 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 EXT2Q93063 718 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 SLAMF9Q96A28 289 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 MIB2Q96AX9 1013 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 RNF31Q96EP0 1072 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 BSCL2Q96G97 398 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 TBCDQ9BTW9 1192 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 ABHD6Q9BV23 337 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 FZD8Q9H461 694 aa4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 PRMT7Q9NVM4 692 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 SMPD3Q9NY59 655 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P21-201ENST00000502313 MIS18AQ9NYP9 233 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms