RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 MAP7Q14244 749 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 ATP6AP1Q15904 470 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 SPATS1Q496A3 300 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 ATP6AP1LQ52LC2 224 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 HABP4Q5JVS0 413 aaKnown RBP9.73□□□□□ -0.85
CLIP1-204ENST00000501271 NANOGP8Q6NSW7 305 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 GOLGA7Q7Z5G4 137 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 ZFAND4Q86XD8 727 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 CAMK1DQ8IU85 385 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 SFRP1Q8N474 314 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 CARNMT1Q8N4J0 409 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 PACRGLQ8N7B6 248 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 WFDC5Q8TCV5 224 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 NUDT8Q8WV74 236 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 CENPNQ96H22 339 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-204ENST00000501271 HAUS8Q9BT25 410 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 PIF1Q9H611 641 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 NANOGQ9H9S0 305 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 RIC8BQ9NVN3 520 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 TRPM5Q9NZQ8 1165 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 ZIM2Q9NZV7 527 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 TMCO1Q9UM00 188 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 H0Y626 953 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 K7ERQ8 282 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 OR7A17O14581 309 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 ACOX3O15254 700 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 TBL1XO60907 577 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 MT-ND1P03886 318 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 CNPP09543 421 aaKnown RBP9.73□□□□□ -0.85
CLIP1-204ENST00000501271 ITGB6P18564 788 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 HRH2P25021 359 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 SLC5A2P31639 672 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 ALDH3B2P48448 385 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 SH3BGRP55822 239 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-204ENST00000501271 RHOAP61586 193 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 CACNG1Q06432 222 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 ADRM1Q16186 407 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 AAK1Q2M2I8 961 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 PLA2G4EQ3MJ16 856 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 FRA10AC1Q70Z53 315 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 TRIML2Q8N7C3 387 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 TRPV3Q8NET8 790 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 OR6K2Q8NGY2 324 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 CD99L2Q8TCZ2 262 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 LKAAEAR1Q8TD35 194 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 SEPT8Q92599 483 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 CEP295NLQ96MC4 621 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 CLSTN3Q9BQT9 956 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 ADI1Q9BV57 179 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 BOCQ9BWV1 1114 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 GPR63Q9BZJ6 419 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 MUC13Q9H3R2 512 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 ACTL8Q9H568 366 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 OCEL1Q9H607 264 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 RPF2Q9H7B2 306 aaKnown RBP9.73□□□□□ -0.85
CLIP1-204ENST00000501271 SUN2Q9UH99 717 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 VPS51Q9UID3 782 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 PHF24Q9UPV7 400 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 DHRS7Q9Y394 339 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 PKP3Q9Y446 797 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 COMMD10Q9Y6G5 202 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 V9GYQ6 96 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 MICAL3Q7RTP6 2002 aa9.73□□□□□ -0.85
CLIP1-204ENST00000501271 GAPDHSO14556 408 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 PRMT5O14744 637 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 LSM1O15116 133 aaKnown RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 G6PDP11413 515 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 RFC2P35250 354 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 HMGCLP35914 325 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 EEFSECP57772 596 aaKnown RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 OR4D2P58180 307 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 PCBP2Q15366 365 aaKnown RBP eCLIP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 PYCR3Q53H96 274 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 IL27RAQ6UWB1 636 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 FAM151BQ6UXP7 276 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 SPRED1Q7Z699 444 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 FAM126BQ8IXS8 530 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 STK40Q8N2I9 435 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 LRRC43Q8N309 656 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 OR4F6Q8NGB9 312 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 METTL6Q8TCB7 284 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 BHMTQ93088 406 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 ISG20Q96AZ6 181 aaKnown RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 SLC22A12Q96S37 553 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 FEM1AQ9BSK4 669 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 C9orf16Q9BUW7 83 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 TM6SF2Q9BZW4 377 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 HEBP1Q9NRV9 189 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 DDX18Q9NVP1 670 aaKnown RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 YIPF1Q9Y548 306 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 SLC30A1Q9Y6M5 507 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 RNF103-CHMP3A0A140T963 221 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 EI24O14681 340 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 HOXA2O43364 376 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 AOC2O75106 756 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 KATNA1O75449 491 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 RSL1D1O76021 490 aaKnown RBP9.72□□□□□ -0.85
CLIP1-204ENST00000501271 RASAL1O95294 804 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 PRAMEF1O95521 474 aa9.72□□□□□ -0.85
CLIP1-204ENST00000501271 CLIC3O95833 236 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms