RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 NAGSQ8N159 534 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 GBGT1Q8N5D6 347 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 C1orf52Q8N6N3 182 aaKnown RBP3.16□□□□□ -1.9
PSPC1-205ENST00000497722 OR5R1Q8NH85 324 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 NSUN4Q96CB9 384 aaKnown RBP3.16□□□□□ -1.9
PSPC1-205ENST00000497722 CEP295NLQ96MC4 621 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 INPP4AQ96PE3 977 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-205ENST00000497722 PAFAH2Q99487 392 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 HGH1Q9BTY7 390 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 KIFC3Q9BVG8 833 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 MXD3Q9BW11 206 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 CSTL1Q9H114 145 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 SEMA6AQ9H2E6 1030 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 DENND2DQ9H6A0 471 aaPredicted RBP3.16□□□□□ -1.9
PSPC1-205ENST00000497722 TRPC7Q9HCX4 862 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 PSD3Q9NYI0 1048 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 DONSONQ9NYP3 566 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 STK26Q9P289 416 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 POLG2Q9UHN1 485 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 PADI3Q9ULW8 664 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 PTRH2Q9Y3E5 179 aaKnown RBP3.16□□□□□ -1.9
PSPC1-205ENST00000497722 JRKLQ9Y4A0 524 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.16□□□□□ -1.9
PSPC1-205ENST00000497722 CGNL1Q0VF96 1302 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 TAF1P21675 1872 aa3.16□□□□□ -1.9
PSPC1-205ENST00000497722 LOC100509620A0A075B734 347 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 CDRT15L2A8MXV6 281 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 EIF3DO15371 548 aaKnown RBP eCLIP3.15□□□□□ -1.91
PSPC1-205ENST00000497722 FGF17O60258 216 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 BEST1O76090 585 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 ZWINTO95229 277 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 SP1P08047 785 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 HRH2P25021 359 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 AHRP35869 848 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 NNMTP40261 264 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 HOXA1P49639 335 aaPredicted RBP3.15□□□□□ -1.91
PSPC1-205ENST00000497722 FUT6P51993 359 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 IRF3Q14653 427 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 DLG2Q15700 870 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 C15orf59Q2T9L4 293 aaPredicted RBP3.15□□□□□ -1.91
PSPC1-205ENST00000497722 SOWAHCQ53LP3 525 aaPredicted RBP3.15□□□□□ -1.91
PSPC1-205ENST00000497722 SIRPB2Q5JXA9 342 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 NDUFAF5Q5TEU4 345 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 ADALQ6DHV7 355 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 GFRALQ6UXV0 394 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 CFAP77Q6ZQR2 320 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 ASB18Q6ZVZ8 466 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 INTS8Q75QN2 995 aaKnown RBP3.15□□□□□ -1.91
PSPC1-205ENST00000497722 SLC26A9Q7LBE3 791 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 TRMT1LQ7Z2T5 733 aaKnown RBP3.15□□□□□ -1.91
PSPC1-205ENST00000497722 GALNT5Q7Z7M9 940 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 SATL1Q86VE3 508 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 LONP2Q86WA8 852 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 NRROSQ86YC3 692 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 MCEMP1Q8IX19 187 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 GCSAMQ8N6F7 178 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 LMNTD1Q8N9Z9 388 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 OR52I2Q8NH67 350 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 SPATA22Q8NHS9 363 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 TRPC4APQ8TEL6 797 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 SORCS1Q8WY21 1168 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 SEMA4DQ92854 862 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 MTERF3Q96E29 417 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 NODALQ96S42 347 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 LRRC1Q9BTT6 524 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 EBF2Q9HAK2 575 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 GIMAP4Q9NUV9 329 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 TMEM30AQ9NV96 361 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 PAG1Q9NWQ8 432 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 FAM118AQ9NWS6 357 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 TAAR2Q9P1P5 351 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 SWAP70Q9UH65 585 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 HACL1Q9UJ83 578 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 EXO1Q9UQ84 846 aaKnown RBP3.15□□□□□ -1.91
PSPC1-205ENST00000497722 SNX8Q9Y5X2 465 aa3.15□□□□□ -1.91
PSPC1-205ENST00000497722 ZNF644Q9H582 1327 aaPredicted RBP3.15□□□□□ -1.91
PSPC1-205ENST00000497722 A0A1W2PS18 150 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 ZNF587BE7ETH6 402 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 PLK4O00444 970 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 CLIC2O15247 247 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 NDUFS4O43181 175 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 AHCYL1O43865 530 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 ZNF217O75362 1048 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 GJB3O75712 270 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 LDHCP07864 332 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 HSP90AA1P07900 732 aaKnown RBP3.14□□□□□ -1.91
PSPC1-205ENST00000497722 ZNF23P17027 643 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 ACADLP28330 430 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 NMBRP28336 390 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 RPS18P62269 152 aaKnown RBP3.14□□□□□ -1.91
PSPC1-205ENST00000497722 PHEXP78562 749 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 ARL16Q0P5N6 197 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 MVPQ14764 893 aaKnown RBP3.14□□□□□ -1.91
PSPC1-205ENST00000497722 TOMM20Q15388 145 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 FAM98BQ52LJ0 330 aaKnown RBP3.14□□□□□ -1.91
PSPC1-205ENST00000497722 BMP2KLQ5H9B9 411 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 ALS2CLQ60I27 953 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 GPR139Q6DWJ6 353 aa3.14□□□□□ -1.91
PSPC1-205ENST00000497722 PACS1Q6VY07 963 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms