RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 CTSCP53634 463 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 PDE1BQ01064 536 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 GPS1Q13098 491 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 SQSTM1Q13501 440 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 SEMA5AQ13591 1074 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 ITGA9Q13797 1035 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 TRADDQ15628 312 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 LDLRAP1Q5SW96 308 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 IZUMO3Q5VZ72 239 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 HIBCHQ6NVY1 386 aaPredicted RBP15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 MICALCLQ6ZW33 695 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 GSPT2Q8IYD1 628 aaKnown RBP15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 GDAP1Q8TB36 358 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 FBXO25Q8TCJ0 367 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 TIMM29Q9BSF4 260 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 SYNDIG1Q9H7V2 258 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 POLR1BQ9H9Y6 1135 aa15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 PIH1D1Q9NWS0 290 aaKnown RBP15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 SCHIP1Q9P0W5 487 aaPredicted RBP15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 KMT2BQ9UMN6 2715 aaPredicted RBP15.72■□□□□ 0.11
CTDSP1-214ENST00000497677 COL27A1Q8IZC6 1860 aaPredicted RBP15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 ACACAQ13085 2346 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 MROH6A6NGR9 719 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 TLX3O43711 291 aaPredicted RBP15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 KRT37O76014 449 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 F3P13726 295 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 GRIA1P42261 906 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 ITGA8P53708 1063 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 GABREP78334 506 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 CFHR1Q03591 330 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 NFATC2Q13469 925 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 PPP1R21Q6ZMI0 780 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 ZNF574Q6ZN55 896 aaPredicted RBP15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 LINC00523Q86TU6 105 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 RELL1Q8IUW5 271 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 SLITRK4Q8IW52 837 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 PPIL6Q8IXY8 311 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 OR52K1Q8NGK4 314 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 DNAJC1Q96KC8 554 aaKnown RBP15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 ASB8Q9H765 288 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 RAB6BQ9NRW1 208 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 SATB2Q9UPW6 733 aa15.71■□□□□ 0.11
CTDSP1-214ENST00000497677 IGHV1OR21-1A0A087WYE8 117 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 KIR2DS5A0A0G2JLQ3 304 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 A0A0G2JNG1 304 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 H7C0S8 307 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 KIR2DS3K7RE56 304 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 CCL22O00626 93 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 SGTAO43765 313 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 SNX2O60749 519 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 BRAFP15056 766 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 CCKBRP32239 447 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 HADHAP40939 763 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 INHBCP55103 352 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 TMPRSS15P98073 1019 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 DHX9Q08211 1270 aaKnown RBP15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 POU6F1Q14863 301 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 KIR2DS5Q14953 304 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 TRIP13Q15645 432 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 PLA2G4EQ3MJ16 856 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 TMEM220Q6QAJ8 160 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 IGF2-ASQ6U949 168 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 ABRAXAS1Q6UWZ7 409 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 USP53Q70EK8 1073 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 TRMT10CQ7L0Y3 403 aaKnown RBP15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 CCDC97Q96F63 343 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 LIN37Q96GY3 246 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 NUDT22Q9BRQ3 303 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 RDH14Q9HBH5 336 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 SARS2Q9NP81 518 aaKnown RBP15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 ASCL3Q9NQ33 180 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 CASS4Q9NQ75 786 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 NLE1Q9NVX2 485 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 PCDHGA8Q9Y5G5 932 aa15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 DNMT3AQ9Y6K1 912 aaPredicted RBP15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 URB1O60287 2271 aaKnown RBP15.7■□□□□ 0.1
CTDSP1-214ENST00000497677 TRBV5-4A0A0C4DH59 114 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 OR5K4A6NMS3 321 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 EIF3HO15372 352 aaKnown RBP eCLIP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 POP7O75817 140 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 CPNE6O95741 557 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 FAM153BP0C7A2 387 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 HOXB3P14651 431 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 VPS41P49754 854 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 CDKN1CP49918 316 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 UBE2IP63279 158 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 HHEXQ03014 270 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 DMPKQ09013 629 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 CDH17Q12864 832 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 GTF2H3Q13889 308 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 CLPPQ16740 277 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 KCTD19Q17RG1 926 aaPredicted RBP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 INSCQ1MX18 579 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 TBC1D25Q3MII6 688 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 AMZ1Q400G9 498 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 FAM153CQ494X1 144 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 C3orf38Q5JPI3 329 aa15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 RNASEH2BQ5TBB1 312 aaKnown RBP15.69■□□□□ 0.1
CTDSP1-214ENST00000497677 NKAIN2Q5VXU1 208 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms