RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 CALCAP01258 141 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 HOXC4P09017 264 aaPredicted RBP7.56□□□□□ -1.2
VPS45-210ENST00000497638 XPAP23025 273 aaPredicted RBP7.56□□□□□ -1.2
VPS45-210ENST00000497638 CSF2RBP32927 897 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 STAT1P42224 750 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 ME1P48163 572 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 CXCR3P49682 368 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 MC2RQ01718 297 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 GCNT1Q02742 428 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 GNA12Q03113 381 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 RAD51Q06609 339 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 PDCLQ13371 301 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 PEX6Q13608 980 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 RAPGEF1Q13905 1077 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 ICAM4Q14773 271 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 EIF2S3LQ2VIR3 472 aaKnown RBP7.56□□□□□ -1.2
VPS45-210ENST00000497638 MYLK3Q32MK0 819 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 KCTD16Q68DU8 428 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 DENND5AQ6IQ26 1287 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 DENND1BQ6P3S1 775 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 TMEM71Q6P5X7 295 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 FOXR2Q6PJQ5 311 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 APLFQ8IW19 511 aaPredicted RBP7.56□□□□□ -1.2
VPS45-210ENST00000497638 PHOSPHO1Q8TCT1 267 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 VOPP1Q96AW1 172 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 C1orf74Q96LT6 269 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 GDAP1L1Q96MZ0 367 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 TKTL2Q9H0I9 626 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 DEF6Q9H4E7 631 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 WDCPQ9H6R7 721 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 UPF2Q9HAU5 1272 aaKnown RBP7.56□□□□□ -1.2
VPS45-210ENST00000497638 BARX1Q9HBU1 254 aaPredicted RBP7.56□□□□□ -1.2
VPS45-210ENST00000497638 METTL14Q9HCE5 456 aaKnown RBP7.56□□□□□ -1.2
VPS45-210ENST00000497638 FBXO8Q9NRD0 319 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 PDP2Q9P2J9 529 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 ZNF212Q9UDV6 495 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 ERRFI1Q9UJM3 462 aaPredicted RBP7.56□□□□□ -1.2
VPS45-210ENST00000497638 PHTF1Q9UMS5 762 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 RPS6KL1Q9Y6S9 549 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 MED13LQ71F56 2210 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 ANKRD36A6QL64 1941 aa7.56□□□□□ -1.2
VPS45-210ENST00000497638 IGHV1OR21-1A0A087WYE8 117 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 TMEM202A6NGA9 273 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 TCP11X1B4DZS4 312 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 PMM2O15305 246 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 PCCBP05166 539 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 CCNB1P14635 433 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 LEPRP48357 1165 aaKnown RBP7.55□□□□□ -1.2
VPS45-210ENST00000497638 PGDP52209 483 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 ILF3Q12906 894 aaKnown RBP eCLIP7.55□□□□□ -1.2
VPS45-210ENST00000497638 MRPL49Q13405 166 aaKnown RBP7.55□□□□□ -1.2
VPS45-210ENST00000497638 INPP5JQ15735 1006 aaPredicted RBP7.55□□□□□ -1.2
VPS45-210ENST00000497638 OTUD1Q5VV17 481 aaPredicted RBP7.55□□□□□ -1.2
VPS45-210ENST00000497638 SLC26A9Q7LBE3 791 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 KAT5Q92993 513 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 SLC35C1Q96A29 364 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 FUBP1Q96AE4 644 aaKnown RBP7.55□□□□□ -1.2
VPS45-210ENST00000497638 MBD6Q96DN6 1003 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 C5orf34Q96MH7 638 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 GSDMCQ9BYG8 508 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 ZYG11BQ9C0D3 744 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 PIGVQ9NUD9 493 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 SPATS2LQ9NUQ6 558 aaKnown RBP7.55□□□□□ -1.2
VPS45-210ENST00000497638 ARMCX3Q9UH62 379 aaPredicted RBP7.55□□□□□ -1.2
VPS45-210ENST00000497638 PCDHA7Q9UN72 937 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 CNTN6Q9UQ52 1028 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 COQ6Q9Y2Z9 468 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 TSC22D4Q9Y3Q8 395 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 MFHAS1Q9Y4C4 1052 aa7.55□□□□□ -1.2
VPS45-210ENST00000497638 PCDHGA9Q9Y5G4 932 aaKnown RBP7.55□□□□□ -1.2
VPS45-210ENST00000497638 MRPS18BQ9Y676 258 aaKnown RBP7.55□□□□□ -1.2
VPS45-210ENST00000497638 TNRC6AQ8NDV7 1962 aaKnown RBP7.54□□□□□ -1.2
VPS45-210ENST00000497638 TSPAN11A1L157 253 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 PRSS38A1L453 326 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 CFAP69A5D8W1 941 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 ZSCAN5CA6NGD5 496 aaPredicted RBP7.54□□□□□ -1.2
VPS45-210ENST00000497638 I6L893 689 aaPredicted RBP7.54□□□□□ -1.2
VPS45-210ENST00000497638 LRCH4O75427 683 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 GRAP2O75791 330 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 IGSF6O95976 241 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 F9P00740 461 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 FGF1P05230 155 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 KRT5P13647 590 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 DLSTP36957 453 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 FMO5P49326 533 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 SNX16P57768 344 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 CETN1Q12798 172 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 ERV3-1Q14264 604 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 NADK2Q4G0N4 442 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 ATXN7L2Q5T6C5 722 aaPredicted RBP7.54□□□□□ -1.2
VPS45-210ENST00000497638 NKAIN2Q5VXU1 208 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 PAPD7Q5XG87 772 aaKnown RBP7.54□□□□□ -1.2
VPS45-210ENST00000497638 MRM1Q6IN84 353 aaKnown RBP7.54□□□□□ -1.2
VPS45-210ENST00000497638 ERAP2Q6P179 960 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 ZNF585AQ6P3V2 769 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 OLFML1Q6UWY5 402 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 C11orf57Q6ZUT1 292 aaPredicted RBP7.54□□□□□ -1.2
VPS45-210ENST00000497638 ARHGAP22Q7Z5H3 698 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 TRIM48Q8IWZ4 208 aa7.54□□□□□ -1.2
VPS45-210ENST00000497638 DRC7Q8IY82 874 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms