RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 PIK3R3Q92569 461 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 UBE2FQ969M7 185 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 PHOX2BQ99453 314 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 FSD1LQ9BXM9 530 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 TAS2R9Q9NYW1 312 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 TSR3Q9UJK0 312 aaKnown RBP12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 TPRKBQ9Y3C4 175 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 FER1L6Q2WGJ9 1857 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 A0A1W2PP18 115 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 CDK14O94921 469 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 GABARAPL2P60520 117 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 TMEM132DQ14C87 1099 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 UNC50Q53HI1 259 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 VARS2Q5ST30 1063 aaKnown RBP12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 CELF3Q5SZQ8 465 aaKnown RBP12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 NBPF12Q5TAG4 269 aaPredicted RBP12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 PKN3Q6P5Z2 889 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 BLOC1S3Q6QNY0 202 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 ZNF438Q7Z4V0 828 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 HID1Q8IV36 788 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 NPWQ8N729 165 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 FLAD1Q8NFF5 587 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 CCDC120Q96HB5 630 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 Q96MT0 163 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 ACOX2Q99424 681 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 ACTR8Q9H981 624 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 RANGRFQ9HD47 186 aaPredicted RBP12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 C12orf4Q9NQ89 552 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 UCKL1Q9NWZ5 548 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 IPPQ9Y573 584 aa12.93□□□□□ -0.34
GAPVD1-220ENST00000497580 LOC110117498-PIK3R3F6TDL0 507 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 RGS10O43665 173 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 NOS2P35228 1153 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 HTR3AP46098 478 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 DGKQP52824 942 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 PXDC1Q5TGL8 231 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 B3GNT8Q7Z7M8 397 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 TRIM48Q8IWZ4 208 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 EID3Q8N140 333 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 NACC2Q96BF6 587 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 SLC47A1Q96FL8 570 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 SNX18Q96RF0 628 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 CHCHD6Q9BRQ6 235 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 BTBD2Q9BX70 525 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 USE1Q9NZ43 259 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 ADGRE2Q9UHX3 823 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 PCDHB14Q9Y5E9 798 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 USP3Q9Y6I4 520 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 PSME4Q14997 1843 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 A0A1B0GTL3 188 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 NTRK1P04629 796 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 ADIGQ0VDE8 80 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 ZNF678Q5SXM1 525 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 CES5AQ6NT32 575 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 SYCE2Q6PIF2 218 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 ZNF517Q6ZMY9 492 aaPredicted RBP12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 PDZD4Q76G19 769 aaPredicted RBP12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 RAB44Q7Z6P3 723 aaPredicted RBP12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 LACC1Q8IV20 430 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 FNDC5Q8NAU1 212 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 RBM4BQ9BQ04 359 aaKnown RBP12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 RBM4Q9BWF3 364 aaKnown RBP12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 MINDY3Q9H8M7 445 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 CYP3A43Q9HB55 503 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 NUFIP1Q9UHK0 495 aaKnown RBP12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 LEF1Q9UJU2 399 aaPredicted RBP12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 KLHL20Q9Y2M5 609 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 PPEF2O14830 753 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 PFKLP17858 780 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 GADD45AP24522 165 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 BAG6P46379 1132 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 TUBA1BP68363 451 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 SLX4IPQ5VYV7 408 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 TUBA1AQ71U36 451 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 DET1Q7L5Y6 550 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 TMEM179BQ7Z7N9 219 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 HORMAD1Q86X24 394 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 SLC22A9Q8IVM8 553 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 SNAPC3Q92966 411 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 MMP28Q9H239 520 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 RUBCNLQ9H714 662 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 PCDHGB6Q9Y5F9 930 aa12.92□□□□□ -0.34
GAPVD1-220ENST00000497580 ASPDHA6ND91 283 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 SLC22A3O75751 556 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 GGT5P36269 586 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 POLR2JP52435 117 aaKnown RBP12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 GRM1Q13255 1194 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 SLAMF1Q13291 335 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 TYSND1Q2T9J0 566 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 PCID2Q5JVF3 399 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 LRRC8DQ7L1W4 858 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 PROSER1Q86XN7 944 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 AMER2Q8N7J2 671 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 OR10A6Q8NH74 314 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 SH3RF2Q8TEC5 729 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 SLC35F5Q8WV83 523 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 PMEPA1Q969W9 287 aa12.91□□□□□ -0.34
GAPVD1-220ENST00000497580 CLPBQ9H078 707 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms