RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 UGT1A5P35504 534 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 SQLEQ14534 574 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 ATP6AP1LQ52LC2 224 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 PSAPL1Q6NUJ1 521 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 DOK6Q6PKX4 331 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 PARS2Q7L3T8 475 aaKnown RBP8.26□□□□□ -1.09
USP54-215ENST00000497106 NLRP8Q86W28 1048 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 SORCS1Q8WY21 1168 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 DTD2Q96FN9 168 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 PPP3R2Q96LZ3 170 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 IL26Q9NPH9 171 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 ITM2CQ9NQX7 267 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 DOLKQ9UPQ8 538 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 A8MT66 165 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 KMOO15229 486 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 MAP3K13O43283 966 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 RECQL5O94762 991 aaPredicted RBP8.26□□□□□ -1.09
USP54-215ENST00000497106 GUCA1CO95843 209 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 LBPP18428 481 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 CCND1P24385 295 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 NDUFS1P28331 727 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 PRDX6P30041 224 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 GRK3P35626 688 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 ETV4P43268 484 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 PRKCQQ04759 706 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 LAPTM5Q13571 262 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 C2orf27AQ580R0 203 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 SYNPOQ8N3V7 929 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 METTL6Q8TCB7 284 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 CCDC138Q96M89 665 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 AHSPQ9NZD4 102 aa8.26□□□□□ -1.09
USP54-215ENST00000497106 NDRG2Q9UN36 371 aaKnown RBP8.26□□□□□ -1.09
USP54-215ENST00000497106 LINC01565O15544 149 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 ZW10O43264 779 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 STK16O75716 305 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 C6P13671 934 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 KCNK10P57789 538 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 NFKB2Q00653 900 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 SEMA3AQ14563 771 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 TSNQ15631 228 aaKnown RBP8.25□□□□□ -1.09
USP54-215ENST00000497106 UBAP2Q5T6F2 1119 aaKnown RBP8.25□□□□□ -1.09
USP54-215ENST00000497106 CAPN13Q6MZZ7 669 aaPredicted RBP8.25□□□□□ -1.09
USP54-215ENST00000497106 ARMC6Q6NXE6 501 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 PARM1Q6UWI2 310 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 LIPIQ6XZB0 460 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 Q6ZVL8 140 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 MTDHQ86UE4 582 aaKnown RBP8.25□□□□□ -1.09
USP54-215ENST00000497106 ETFBKMTQ8IXQ9 262 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 SYTL1Q8IYJ3 562 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 GLMNQ92990 594 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 PRPF18Q99633 342 aaKnown RBP8.25□□□□□ -1.09
USP54-215ENST00000497106 ABCG8Q9H221 673 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 PARVBQ9HBI1 364 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 TRPV5Q9NQA5 729 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 CLEC4EQ9ULY5 219 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 DYTNA2CJ06 578 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 MMP20O60882 483 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 SKAP2O75563 359 aaPredicted RBP8.25□□□□□ -1.09
USP54-215ENST00000497106 UROSP10746 265 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 MMP12P39900 470 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 RPA4Q13156 261 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 C11orf91Q3C1V1 193 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 C10orf62Q5T681 223 aaPredicted RBP8.25□□□□□ -1.09
USP54-215ENST00000497106 SPATA19Q7Z5L4 167 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 CLEC14AQ86T13 490 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 AMZ2Q86W34 360 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 KRT78Q8N1N4 520 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 EPHX3Q9H6B9 360 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 COG4Q9H9E3 785 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 SLCO1B3Q9NPD5 702 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 AP3M1Q9Y2T2 418 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 TRAF6Q9Y4K3 522 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 OARD1Q9Y530 152 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 PDZK1P1A8MUH7 402 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 TOR1BO14657 336 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 ZNF217O75362 1048 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 C1SP09871 688 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 HGFP14210 728 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 PTPN4P29074 926 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 RPIAP49247 311 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 BLKP51451 505 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 CLCQ05315 142 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 TGM3Q08188 693 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 TDGQ13569 410 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 ZNF460Q14592 562 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 KRT72Q14CN4 511 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 PON2Q15165 354 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 USP30Q70CQ3 517 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 OOSP2Q86WS3 158 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 TEX9Q8N6V9 391 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 ZNF366Q8N895 744 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 DDHD1Q8NEL9 900 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 TRPC4APQ8TEL6 797 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 UNKQ9C0B0 810 aaKnown RBP8.25□□□□□ -1.09
USP54-215ENST00000497106 TRIT1Q9H3H1 467 aaKnown RBP8.25□□□□□ -1.09
USP54-215ENST00000497106 OSGEPL1Q9H4B0 414 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 TRIM39Q9HCM9 518 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 FZD4Q9ULV1 537 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 KCNE2Q9Y6J6 123 aa8.25□□□□□ -1.09
USP54-215ENST00000497106 VWA8A3KMH1 1905 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms