RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 WARS2Q9UGM6 360 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 POLLQ9UGP5 575 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CDH9Q9ULB4 789 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 RNF24Q9Y225 148 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 STXBP5LQ9Y2K9 1186 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ACOT9Q9Y305 439 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 POMT1Q9Y6A1 747 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 SPACA6W5XKT8 324 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF608Q9ULD9 1512 aaPredicted RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 SCAF11Q99590 1463 aaKnown RBP3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 KIAA1210Q9ULL0 1709 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 CCDC7Q96M83 1385 aa3.08□□□□□ -1.92
SNRNP48-202ENST00000496946 PNMA6EA0A0J9YXQ4 647 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 A4D1N5 150 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ARHGEF35A5YM69 484 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CCDC154A6NI56 674 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF839A8K0R7 811 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 E9PI62 339 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 H0Y8G0 127 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 H3BML4 177 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 DNM1LO00429 736 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 AQP9O43315 295 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PDE8BO95263 885 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TNFRSF6BO95407 300 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 MLYCDO95822 493 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 MPIG6BO95866 241 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 LGI1O95970 557 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 C4BPAP04003 597 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 HMGCRP04035 888 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TPOP07202 933 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CLEC2LP0C7M8 214 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SRCP12931 536 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 OSMP13725 252 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TSHRP16473 764 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 CXCR2P25025 360 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RPA1P27694 616 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 HTR1BP28222 390 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 OXTRP30559 389 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RCVRNP35243 200 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SPAM1P38567 509 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 EIF2S3P41091 472 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PPP3CCP48454 512 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF81P51508 661 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 VAMP2P63027 116 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SKP1P63208 163 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 POU6F2P78424 691 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 DSG1Q02413 1049 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 GHRHRQ02643 423 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TRAF2Q12933 501 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 GPS1Q13098 491 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PEX6Q13608 980 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 THOC5Q13769 683 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 KPNB1Q14974 876 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 KYNUQ16719 465 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 GSTA3Q16772 222 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TXNRD1Q16881 649 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RNF151Q2KHN1 245 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TMEM44Q2T9K0 475 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF829Q3KNS6 432 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PCGF3Q3KNV8 242 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 IQCCQ4KMZ1 466 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 LIN52Q52LA3 116 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 XKR4Q5GH76 650 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 LCN1P1Q5VSP4 162 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PRAMEF20Q5VT98 475 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 LIPNQ5VXI9 398 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RRAGBQ5VZM2 374 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ARHGAP17Q68EM7 881 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SULT6B1Q6IMI4 303 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ZNF585AQ6P3V2 769 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TRAT1Q6PIZ9 186 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 DPP8Q6V1X1 898 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TTLL10Q6ZVT0 673 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 HTR3DQ70Z44 454 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 MIGA2Q7L4E1 593 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 NUDT13Q86X67 352 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 METTL23Q86XA0 190 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 HIPK1Q86Z02 1210 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 UBL4BQ8N7F7 174 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 MRPL43Q8N983 215 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 TTC29Q8NA56 475 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 LEMD2Q8NC56 503 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 SLC37A3Q8NCC5 494 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 OR14K1Q8NGZ2 314 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 OR14C36Q8NHC7 312 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 RP9Q8TA86 221 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 BBS10Q8TAM1 723 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 GIPC3Q8TF64 312 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PYDC1Q8WXC3 89 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ING5Q8WYH8 240 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 OR1E3Q8WZA6 343 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 C1GALT1C1Q96EU7 318 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 MVB12AQ96EY5 273 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 OLFM1Q99784 485 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 C17orf80Q9BSJ5 609 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 MTG1Q9BT17 334 aaPredicted RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 LRFN3Q9BTN0 628 aa3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 PAPOLGQ9BWT3 736 aaKnown RBP3.07□□□□□ -1.92
SNRNP48-202ENST00000496946 ADGRE3Q9BY15 652 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms