RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 ZNF668Q96K58 619 aaPredicted RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 UBXN10Q96LJ8 280 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 CMTM3Q96MX0 182 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 RDH12Q96NR8 316 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 GAS2L1Q99501 681 aaPredicted RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 NPAS2Q99743 824 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 SH2D3AQ9BRG2 576 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 ISCA1Q9BUE6 129 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 PDCD10Q9BUL8 212 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 TTYH1Q9H313 450 aaPredicted RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 TFB2MQ9H5Q4 396 aaKnown RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 ESRP2Q9H6T0 727 aaKnown RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 GAREM1Q9H706 876 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 RNF121Q9H920 327 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 BABAM2Q9NXR7 383 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 USE1Q9NZ43 259 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 FAM198AQ9UFP1 575 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 DCDC2Q9UHG0 476 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 TBC1D24Q9ULP9 559 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 ING4Q9UNL4 249 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 MGAT4BQ9UQ53 548 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 VPS9D1Q9Y2B5 631 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 PCDHA2Q9Y5H9 948 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 PKD1L3Q7Z443 1732 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 AFDNP55196 1824 aaKnown RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 DICER1Q9UPY3 1922 aaKnown RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 FAM149AA5PLN7 773 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 FAM170BA6NMN3 283 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 NRP1O14786 923 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 H2AFYO75367 372 aaKnown RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 RAF1P04049 648 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 NR3C1P04150 777 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 URODP06132 367 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 TPOP07202 933 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 NFICP08651 508 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 HTR1AP08908 422 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 ETS1P14921 441 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 OXTRP30559 389 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 SOX6P35712 828 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 NSFP46459 744 aaKnown RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 SPCS3P61009 180 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 EMX1Q04741 257 aaPredicted RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 FPGSQ05932 587 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 CCINQ13939 588 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 BAATQ14032 418 aaPredicted RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 SCARF1Q14162 830 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 CAPRIN1Q14444 709 aaKnown RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 NFIXQ14938 502 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 EMC2Q15006 297 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 QPRTQ15274 297 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 SMAD2Q15796 467 aaKnown RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 SSX2Q16385 188 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 IMPG1Q17R60 797 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 TMEM119Q4V9L6 283 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 PAN2Q504Q3 1202 aaKnown RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 PAN3Q58A45 887 aaKnown RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 SYT6Q5T7P8 510 aaPredicted RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 DCAF8Q5TAQ9 597 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 XRRA1Q6P2D8 792 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 ERICH5Q6P6B1 374 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 ZNF530Q6P9A1 599 aaPredicted RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 STRA8Q7Z7C7 330 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 UNC5BQ8IZJ1 945 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 RDH10Q8IZV5 341 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 C9orf62Q8N4C0 152 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 KBTBD8Q8NFY9 601 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 OR52K2Q8NGK3 314 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 HDAC10Q969S8 669 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 MYLPFQ96A32 169 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 ELP4Q96EB1 424 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 AURKBQ96GD4 344 aaPredicted RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 PPP3R2Q96LZ3 170 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 APBA2Q99767 749 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 ACO2Q99798 780 aaKnown RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 QRSL1Q9H0R6 528 aaKnown RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 PIGUQ9H490 435 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 TMEM39AQ9NV64 488 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 CD300AQ9UGN4 299 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 SARDHQ9UL12 918 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 PNMA8BQ9ULN7 279 aaPredicted RBP6.25□□□□□ -1.41
FGD4-208ENST00000494977 AFG3L2Q9Y4W6 797 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 PCDHB3Q9Y5E6 796 aa6.25□□□□□ -1.41
FGD4-208ENST00000494977 SPATA31A1Q5TZJ5 1347 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 DIP2CQ9Y2E4 1556 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 RPS10-NUDT3A0A1W2PQS6 291 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 MFSD2BA6NFX1 497 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 KBTBD13C9JR72 458 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 TERTO14746 1132 aaKnown RBP6.24□□□□□ -1.41
FGD4-208ENST00000494977 NRP2O60462 931 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 BRINP1O60477 761 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 SRP72O76094 671 aaKnown RBP6.24□□□□□ -1.41
FGD4-208ENST00000494977 GCNT3O95395 438 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 PLATP00750 562 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 LDLRP01130 860 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 CYP17A1P05093 508 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 CD63P08962 238 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 LTA4HP09960 611 aaKnown RBP6.24□□□□□ -1.41
FGD4-208ENST00000494977 RNF224P0DH78 156 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 PRF1P14222 555 aa6.24□□□□□ -1.41
FGD4-208ENST00000494977 IL7RP16871 459 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms