RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 KIF1CO43896 1103 aaKnown RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 RAD1O60671 282 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 ANXA9O76027 345 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 TJP3O95049 919 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 PTMAP06454 111 aaKnown RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 LIFP15018 202 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 VCLP18206 1134 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 MSH3P20585 1137 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 LPOP22079 712 aaPredicted RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 AKT1P31749 480 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 ADRA1AP35348 466 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 CETN2P41208 172 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 LEPRP48357 1165 aaKnown RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 ATP1A2P50993 1020 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 VAV2P52735 878 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 EPHA4P54764 986 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 GPR18Q14330 331 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 NFE2L1Q14494 772 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 PRPSAP1Q14558 356 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 TBR1Q16650 682 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 LDLRAP1Q5SW96 308 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 FNBP1LQ5T0N5 605 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 ZDHHC20Q5W0Z9 365 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 ITPRIPL1Q6GPH6 555 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 CEACAM20Q6UY09 585 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 RANBP10Q6VN20 620 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 FAM83HQ6ZRV2 1179 aaPredicted RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 FAM92BQ6ZTR7 304 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 TIPARPQ7Z3E1 657 aaKnown RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 PLXDC1Q8IUK5 500 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 CDKL3Q8IVW4 592 aaPredicted RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 UNC5BQ8IZJ1 945 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 TAB3Q8N5C8 712 aaPredicted RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 OR13C4Q8NGS5 318 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 MED8Q96G25 268 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 ELMO2Q96JJ3 720 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 BAG1Q99933 345 aaPredicted RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 FERMT1Q9BQL6 677 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 DESI2Q9BSY9 194 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 DDA1Q9BW61 102 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 GBA3Q9H227 469 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 SLC40A1Q9NP59 571 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 FBXO8Q9NRD0 319 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.42□□□□□ -0.9
MSH5-218ENST00000494646 FKBPLQ9UIM3 349 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 PILRAQ9UKJ1 303 aa9.42□□□□□ -0.9
MSH5-218ENST00000494646 AAR2Q9Y312 384 aaKnown RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 CFAP20Q9Y6A4 193 aaKnown RBP9.42□□□□□ -0.9
MSH5-218ENST00000494646 SPTBP11277 2137 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 LOC101059948A0A1B0GTJ6 334 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 LILRA5A6NI73 299 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 PRR19A6NJB7 356 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 BTNL10A8MVZ5 291 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 B8ZZF3 427 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 PYCARD-AS1I3L0S3 204 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 CCL22O00626 93 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 NKX2-8O15522 239 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 RASSF9O75901 435 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 STK10O94804 968 aaKnown RBP9.41□□□□□ -0.9
MSH5-218ENST00000494646 FTCDO95954 541 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 POLBP06746 335 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 PLA2G2AP14555 144 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 TPH1P17752 444 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 FECHP22830 423 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 HALP42357 657 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 RAB15P59190 212 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 SH3BP2P78314 561 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 MSLNQ13421 630 aaPredicted RBP9.41□□□□□ -0.9
MSH5-218ENST00000494646 ITGA9Q13797 1035 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 TAF1AQ15573 450 aaPredicted RBP9.41□□□□□ -0.9
MSH5-218ENST00000494646 RPE65Q16518 533 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 AGAP9Q5VTM2 703 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 CACHD1Q5VU97 1274 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 IRGCQ6NXR0 463 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 WASH2PQ6VEQ5 465 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 PEX26Q7Z412 305 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 CFAP206Q8IYR0 622 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 LRRC57Q8N9N7 239 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 AVL9Q8NBF6 648 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 DDHD1Q8NEL9 900 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 GPR150Q8NGU9 434 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 DTX3LQ8TDB6 740 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 RSC1A1Q92681 617 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 POM121Q96HA1 1249 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 CALR3Q96L12 384 aaKnown RBP9.41□□□□□ -0.9
MSH5-218ENST00000494646 C9orf72Q96LT7 481 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 INSM2Q96T92 566 aaPredicted RBP9.41□□□□□ -0.9
MSH5-218ENST00000494646 TBL1YQ9BQ87 522 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 SLC12A9Q9BXP2 914 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 SPRY4Q9C004 299 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 EPB41L1Q9H4G0 881 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 UCK1Q9HA47 277 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 WASH6PQ9NQA3 447 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 EFR3BQ9Y2G0 817 aa9.41□□□□□ -0.9
MSH5-218ENST00000494646 TCRBV7S2A1N4TA0A589 114 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 GOLGA6L9A6NEM1 432 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 C5orf60A6NFR6 353 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 DDX3YO15523 660 aaKnown RBP9.4□□□□□ -0.9
MSH5-218ENST00000494646 KCNJ13O60928 360 aa9.4□□□□□ -0.9
MSH5-218ENST00000494646 PPFIA2O75334 1257 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms