RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 FRG2Q64ET8 278 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 CNSTQ6PJW8 725 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 IRF2BP2Q7Z5L9 587 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 TLK2Q86UE8 772 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 ZC3HC1Q86WB0 502 aaKnown RBP4.12□□□□□ -1.75
CMSS1-207ENST00000494412 FAM219AQ8IW50 185 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 TIGD4Q8IY51 512 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 MAML2Q8IZL2 1156 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-207ENST00000494412 PCDH20Q8N6Y1 951 aaKnown RBP4.12□□□□□ -1.75
CMSS1-207ENST00000494412 UTP15Q8TED0 518 aaKnown RBP4.12□□□□□ -1.75
CMSS1-207ENST00000494412 ATP6V0A1Q93050 837 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 SLAMF9Q96A28 289 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 CHFRQ96EP1 664 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 PRMT6Q96LA8 375 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-207ENST00000494412 INPP5KQ9BT40 448 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 MOV10L1Q9BXT6 1211 aaKnown RBP4.12□□□□□ -1.75
CMSS1-207ENST00000494412 SLC5A7Q9GZV3 580 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 THAP9Q9H5L6 903 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 SIRT3Q9NTG7 399 aaPredicted RBP4.12□□□□□ -1.75
CMSS1-207ENST00000494412 DPP3Q9NY33 737 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 ERAP1Q9NZ08 941 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 STK26Q9P289 416 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 POLLQ9UGP5 575 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 ITGA11Q9UKX5 1188 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 RNF150Q9ULK6 438 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 SNX7Q9UNH6 387 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 RAI2Q9Y5P3 530 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 NFS1Q9Y697 457 aa4.12□□□□□ -1.75
CMSS1-207ENST00000494412 OOEPA6NGQ2 149 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 SLC33A1O00400 549 aaPredicted RBP4.11□□□□□ -1.75
CMSS1-207ENST00000494412 PLK4O00444 970 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 PPP6CO00743 305 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 WNT9BO14905 357 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 XRCC3O43542 346 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 TLR2O60603 784 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 ATG13O75143 517 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 BCAR3O75815 825 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 MOCS3O95396 460 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 PNPP00491 289 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 PRKCGP05129 697 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 PTMAP06454 111 aaKnown RBP4.11□□□□□ -1.75
CMSS1-207ENST00000494412 P4HA1P13674 534 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 GNAZP19086 355 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 ITGB8P26012 769 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 STX2P32856 288 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 RPL3P39023 403 aaKnown RBP4.11□□□□□ -1.75
CMSS1-207ENST00000494412 KCNJ1P48048 391 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 LIMK1P53667 647 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 PROK1P58294 105 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 TGFB2P61812 414 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 DPTQ07507 201 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 RPA4Q13156 261 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 MTX1Q13505 466 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 GPR18Q14330 331 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 LASP1Q14847 261 aaKnown RBP4.11□□□□□ -1.75
CMSS1-207ENST00000494412 CTF1Q16619 201 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 DECR1Q16698 335 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 PPP6R3Q5H9R7 873 aaPredicted RBP4.11□□□□□ -1.75
CMSS1-207ENST00000494412 LCN10Q6JVE6 187 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 TMEM270Q6UE05 265 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 PCSK4Q6UW60 755 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 PARM1Q6UWI2 310 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 ZNF534Q76KX8 674 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 NRROSQ86YC3 692 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 FOXRED2Q8IWF2 684 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 CNPY4Q8N129 248 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 ZNF619Q8N2I2 560 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 AADATQ8N5Z0 425 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 BOLLQ8N9W6 283 aaKnown RBP4.11□□□□□ -1.75
CMSS1-207ENST00000494412 OR2AK2Q8NG84 335 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 OR2AJ1Q8NGZ0 328 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 HEXDCQ8WVB3 486 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 ATL1Q8WXF7 558 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 TAAR8Q969N4 342 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 TEKT1Q969V4 418 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 OTUB1Q96FW1 271 aaPredicted RBP4.11□□□□□ -1.75
CMSS1-207ENST00000494412 FAM81BQ96LP2 452 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 OR6C1Q96RD1 312 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 PARK7Q99497 189 aaKnown RBP4.11□□□□□ -1.75
CMSS1-207ENST00000494412 PI4K2AQ9BTU6 479 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 FNDC11Q9BVV2 318 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 WNT5BQ9H1J7 359 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 CATSPERBQ9H7T0 1116 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 C17orf75Q9HAS0 396 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 TINAGQ9UJW2 476 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 FBXL2Q9UKC9 423 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 CPSF3Q9UKF6 684 aaKnown RBP4.11□□□□□ -1.75
CMSS1-207ENST00000494412 PCDHA12Q9UN75 941 aa4.11□□□□□ -1.75
CMSS1-207ENST00000494412 TMEM184BQ9Y519 407 aaPredicted RBP4.11□□□□□ -1.75
CMSS1-207ENST00000494412 ARHGEF17Q96PE2 2063 aaPredicted RBP4.1□□□□□ -1.75
CMSS1-207ENST00000494412 COL11A2P13942 1736 aaPredicted RBP4.1□□□□□ -1.75
CMSS1-207ENST00000494412 HEPACAM2A8MVW5 462 aa4.1□□□□□ -1.75
CMSS1-207ENST00000494412 FAM90A26D6RGX4 464 aa4.1□□□□□ -1.75
CMSS1-207ENST00000494412 MS4A18H0YCH9 400 aa4.1□□□□□ -1.75
CMSS1-207ENST00000494412 I6L893 689 aaPredicted RBP4.1□□□□□ -1.75
CMSS1-207ENST00000494412 CLDN4O14493 209 aa4.1□□□□□ -1.75
CMSS1-207ENST00000494412 ANKRD28O15084 1053 aa4.1□□□□□ -1.75
CMSS1-207ENST00000494412 EIF3DO15371 548 aaKnown RBP eCLIP4.1□□□□□ -1.75
CMSS1-207ENST00000494412 KCNN4O15554 427 aa4.1□□□□□ -1.75
CMSS1-207ENST00000494412 ST8SIA3O43173 380 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms