RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 PPP2R2CQ9Y2T4 447 aa7.11□□□□□ -1.27
RBM39-239ENST00000494274 PCDHB11Q9Y5F2 797 aa7.11□□□□□ -1.27
RBM39-239ENST00000494274 DNMT3AQ9Y6K1 912 aaPredicted RBP7.11□□□□□ -1.27
RBM39-239ENST00000494274 URB1O60287 2271 aaKnown RBP7.1□□□□□ -1.27
RBM39-239ENST00000494274 MGAT4DA6NG13 374 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 LILRA5A6NI73 299 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 C9orf172C9J069 976 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 CFAP99D6REC4 459 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 CAPN5O15484 640 aaPredicted RBP7.1□□□□□ -1.27
RBM39-239ENST00000494274 RASSF9O75901 435 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 UBXN7O94888 489 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 FGGP02679 453 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 APRTP07741 180 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 ZSCAN5DPP0CG00 497 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 PRSS56P0CW18 603 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 THRAP10827 490 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 RPL22P35268 128 aaKnown RBP7.1□□□□□ -1.27
RBM39-239ENST00000494274 FDFT1P37268 417 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 GRIA1P42261 906 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 KCNJ1P48048 391 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 SEPHS1P49903 392 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 TERF1P54274 439 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 EPHA4P54764 986 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 UCNP55089 124 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 GFERP55789 205 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 TMPRSS3P57727 454 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 UBE2IP63279 158 aaKnown RBP7.1□□□□□ -1.27
RBM39-239ENST00000494274 CDH17Q12864 832 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 CLN3Q13286 438 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 GPR18Q14330 331 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 KRT33BQ14525 404 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 OASLQ15646 514 aaKnown RBP7.1□□□□□ -1.27
RBM39-239ENST00000494274 CCNG2Q16589 344 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 KCTD19Q17RG1 926 aaPredicted RBP7.1□□□□□ -1.27
RBM39-239ENST00000494274 SKIDA1Q1XH10 827 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 AGAP9Q5VTM2 703 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 METRNLQ641Q3 311 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 IRGCQ6NXR0 463 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 WDR74Q6RFH5 385 aaPredicted RBP7.1□□□□□ -1.27
RBM39-239ENST00000494274 WASH2PQ6VEQ5 465 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 SERPINA9Q86WD7 417 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 PLXDC1Q8IUK5 500 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 NXPE1Q8N323 547 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 GLIS1Q8NBF1 620 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 MAIP1Q8WWC4 291 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 ULK4Q96C45 1275 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 CDKN2AIPNLQ96HQ2 116 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 TGM7Q96PF1 710 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 TAAR9Q96RI9 348 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 CCNL2Q96S94 520 aaPredicted RBP7.1□□□□□ -1.27
RBM39-239ENST00000494274 INSM2Q96T92 566 aaPredicted RBP7.1□□□□□ -1.27
RBM39-239ENST00000494274 WWP1Q9H0M0 922 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 GRPEL1Q9HAV7 217 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 SLC40A1Q9NP59 571 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 WASH6PQ9NQA3 447 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 POT1Q9NUX5 634 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 NLE1Q9NVX2 485 aaPredicted RBP7.1□□□□□ -1.27
RBM39-239ENST00000494274 SMARCAL1Q9NZC9 954 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 PAK5Q9P286 719 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 B3GALT1Q9Y5Z6 326 aa7.1□□□□□ -1.27
RBM39-239ENST00000494274 CFAP20Q9Y6A4 193 aaKnown RBP7.1□□□□□ -1.27
RBM39-239ENST00000494274 PLXNB3Q9ULL4 1909 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 TDRD6O60522 2096 aaKnown RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 APC2O95996 2303 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 OR51F1A6NGY5 319 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 PRR19A6NJB7 356 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 ERI2A8K979 691 aaKnown RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 KIF1CO43896 1103 aaKnown RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 ATP1B2P14415 290 aaPredicted RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 MSNP26038 577 aaKnown RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 LEPRP48357 1165 aaKnown RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 ARSDP51689 593 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 ZNF140P52738 457 aaPredicted RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 BASP1P80723 227 aaKnown RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 FOXM1Q08050 763 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 VAC14Q08AM6 782 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 BRD3Q15059 726 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 PLCL1Q15111 1095 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 TRIP13Q15645 432 aaPredicted RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 RPE65Q16518 533 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 GPR33Q49SQ1 333 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 SOWAHCQ53LP3 525 aaPredicted RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 TAF1BQ53T94 588 aaPredicted RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 MANEAQ5SRI9 462 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 DCAF12Q5T6F0 453 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 ANKS6Q68DC2 871 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 ZNF662Q6ZS27 426 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 FAM92BQ6ZTR7 304 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 ARHGAP22Q7Z5H3 698 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 VASH2Q86V25 355 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 RBM12BQ8IXT5 1001 aaKnown RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 KLHDC8BQ8IXV7 354 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 PIANPQ8IYJ0 282 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 LILRA3Q8N6C8 439 aaPredicted RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 CLDN19Q8N6F1 224 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 SPDYE1Q8NFV5 336 aaPredicted RBP7.09□□□□□ -1.27
RBM39-239ENST00000494274 OR6P1Q8NGX9 317 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 OR2L2Q8NH16 312 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 STYXQ8WUJ0 223 aa7.09□□□□□ -1.27
RBM39-239ENST00000494274 HEXDCQ8WVB3 486 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms