RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 INPP5DQ92835 1189 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 UBXN10Q96LJ8 280 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 HSPA12BQ96MM6 686 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 CCM2Q9BSQ5 444 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 DUSP15Q9H1R2 295 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-231ENST00000494043 KCNK9Q9NPC2 374 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 LATS2Q9NRM7 1088 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 GPR34Q9UPC5 381 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 SLC17A4Q9Y2C5 497 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 EML5Q05BV3 1969 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 CACNA1IQ9P0X4 2223 aa11.23□□□□□ -0.61
MCF2L-231ENST00000494043 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 TMEM202A6NGA9 273 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 KLHL2O95198 593 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 CEACAM5P06731 702 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 GSTM1P09488 218 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 LTA4HP09960 611 aaKnown RBP11.22□□□□□ -0.61
MCF2L-231ENST00000494043 CCDC166P0CW27 439 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 KELP23276 732 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 AOAHP28039 575 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 AVPR2P30518 371 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 CCR7P32248 378 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 RPA3P35244 121 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-231ENST00000494043 RABIFP47224 123 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 CCT5P48643 541 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 SLC18A1P54219 525 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 GSTM4Q03013 218 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 DLG1Q12959 904 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 MPP2Q14168 576 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 GBX1Q14549 363 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 TSNAXIP1Q2TAA8 658 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 TTLL9Q3SXZ7 439 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 PLEKHS1Q5SXH7 462 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 TPRG1LQ5T0D9 272 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 CRTC3Q6UUV7 619 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 Q6ZSR6 202 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 CDHR3Q6ZTQ4 885 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 OTOAQ7RTW8 1153 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 C11orf74Q86VG3 221 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 LRRTM4Q86VH4 590 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 ZNF547Q8IVP9 402 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 CPNE9Q8IYJ1 553 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 TMEFF1Q8IYR6 380 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 PLD6Q8N2A8 252 aaKnown RBP11.22□□□□□ -0.61
MCF2L-231ENST00000494043 NKAPQ8N5F7 415 aaKnown RBP11.22□□□□□ -0.61
MCF2L-231ENST00000494043 BEND7Q8N7W2 519 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-231ENST00000494043 FAM76AQ8TAV0 307 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 FAM174AQ8TBP5 190 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 GAB3Q8WWW8 586 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 ELMO1Q92556 727 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 LINC00615Q96LM1 132 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-231ENST00000494043 WDR92Q96MX6 357 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 SLC6A18Q96N87 628 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 TSNARE1Q96NA8 513 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 DOCK9Q9BZ29 2069 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 IQCGQ9H095 443 aaKnown RBP11.22□□□□□ -0.61
MCF2L-231ENST00000494043 RMI1Q9H9A7 625 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 SYTL2Q9HCH5 934 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 GPR27Q9NS67 375 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 IGSF5Q9NSI5 407 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 DCDC2Q9UHG0 476 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 EIF2B4Q9UI10 523 aaKnown RBP11.22□□□□□ -0.61
MCF2L-231ENST00000494043 SLCO1B1Q9Y6L6 691 aa11.22□□□□□ -0.61
MCF2L-231ENST00000494043 TNFRSF10AO00220 468 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 EIF3FO00303 357 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-231ENST00000494043 KPNA5O15131 536 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 KMOO15229 486 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 TM9SF1O15321 606 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 GRID2O43424 1007 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 ZWINTO95229 277 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 TSPAN12O95859 305 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 CBSLP0DN79 551 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 DGKAP23743 735 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 HTR1BP28222 390 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 PBLDP30039 288 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-231ENST00000494043 CBSP35520 551 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 RGS4P49798 205 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 KPNA2P52292 529 aaKnown RBP11.21□□□□□ -0.61
MCF2L-231ENST00000494043 THOP1P52888 689 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 IL2P60568 153 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 BOP1Q14137 746 aaKnown RBP11.21□□□□□ -0.61
MCF2L-231ENST00000494043 CSHL1Q14406 222 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 FAM83EQ2M2I3 478 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 PLA2G4EQ3MJ16 856 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 ZNF658BQ4V348 819 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-231ENST00000494043 SYTL3Q4VX76 610 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 N4BP2L1Q5TBK1 243 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-231ENST00000494043 AGAP9Q5VTM2 703 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 NAPRTQ6XQN6 538 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 LPCAT2Q7L5N7 544 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 C11orf96Q7Z7L8 435 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 SPATA6LQ8N4H0 392 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 OXR1Q8N573 874 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 ARFGAP2Q8N6H7 521 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 ANKRD42Q8N9B4 389 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 OR13H1Q8NG92 308 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 OR56A4Q8NGH8 313 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 HM13Q8TCT9 377 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 TCP10LQ8TDR4 215 aa11.21□□□□□ -0.61
MCF2L-231ENST00000494043 OR1E3Q8WZA6 343 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms