RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 MAGEA6P43360 314 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 PRLHRP49683 370 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 GPLD1P80108 840 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 PDE1BQ01064 536 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 CDH17Q12864 832 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 SEPT6Q14141 434 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 SEMA3AQ14563 771 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 MAP9Q49MG5 647 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 TSTD2Q5T7W7 516 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 TMEM71Q6P5X7 295 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 TMEM26Q6ZUK4 368 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 ARHGAP22Q7Z5H3 698 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 LINC00523Q86TU6 105 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 SLC9B2Q86UD5 537 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 AMZ2Q86W34 360 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 SPACA3Q8IXA5 215 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 LSMEM2Q8N112 164 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 FBXO39Q8N4B4 442 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 BMPERQ8N8U9 685 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
PDCD11-206ENST00000493610 DCBLD2Q96PD2 775 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 OSBPL9Q96SU4 736 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 AP1M1Q9BXS5 423 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 EIF2B3Q9NR50 452 aaKnown RBP13.39□□□□□ -0.27
PDCD11-206ENST00000493610 ZDHHC3Q9NYG2 299 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 RIMKLBQ9ULI2 386 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 PSMD13Q9UNM6 376 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 PTPRQQ9UMZ3 2332 aa13.39□□□□□ -0.27
PDCD11-206ENST00000493610 MGAT4DA6NG13 374 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 C9orf172C9J069 976 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 KCNJ13O60928 360 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 C9P02748 559 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 ITGA2BP08514 1039 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 FGF3P11487 239 aaPredicted RBP13.38□□□□□ -0.27
PDCD11-206ENST00000493610 MSH3P20585 1137 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 ITGALP20701 1170 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 IDSP22304 550 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 PBLDP30039 288 aaPredicted RBP13.38□□□□□ -0.27
PDCD11-206ENST00000493610 MLLT3P42568 568 aaPredicted RBP13.38□□□□□ -0.27
PDCD11-206ENST00000493610 EPHA4P54764 986 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 CRADDP78560 199 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 TLE3Q04726 772 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 CCDC173Q0VFZ6 552 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 EIF3IQ13347 325 aaKnown RBP13.38□□□□□ -0.27
PDCD11-206ENST00000493610 GTF2H3Q13889 308 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 KCNJ11Q14654 390 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 RPE65Q16518 533 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 GPR33Q49SQ1 333 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 PHF19Q5T6S3 580 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 ANKRD22Q5VYY1 191 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 CAPRIN2Q6IMN6 1127 aaKnown RBP13.38□□□□□ -0.27
PDCD11-206ENST00000493610 FOXR1Q6PIV2 292 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 WDR74Q6RFH5 385 aaPredicted RBP13.38□□□□□ -0.27
PDCD11-206ENST00000493610 CLDN19Q8N6F1 224 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 CCDC89Q8N998 374 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 OR2L2Q8NH16 312 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 MAIP1Q8WWC4 291 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 ULK4Q96C45 1275 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 PBKQ96KB5 322 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 RMDN2Q96LZ7 410 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 INSM2Q96T92 566 aaPredicted RBP13.38□□□□□ -0.27
PDCD11-206ENST00000493610 SLC38A3Q99624 504 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 NRTNQ99748 197 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 ZCCHC2Q9C0B9 1178 aaKnown RBP13.38□□□□□ -0.27
PDCD11-206ENST00000493610 TREX1Q9NSU2 369 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 FOXJ2Q9P0K8 574 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 CRLS1Q9UJA2 301 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 ACSL6Q9UKU0 697 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 SNX12Q9UMY4 172 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 TCAF1Q9Y4C2 921 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 PCDHGA7Q9Y5G6 932 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 SDK2Q58EX2 2172 aa13.38□□□□□ -0.27
PDCD11-206ENST00000493610 MN1Q10571 1320 aaPredicted RBP13.38□□□□□ -0.27
PDCD11-206ENST00000493610 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.37□□□□□ -0.27
PDCD11-206ENST00000493610 PDZK1P1A8MUH7 402 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 TMX2-CTNND1H3BSU7 103 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 NRDCO43847 1150 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 ATP1B2P14415 290 aaPredicted RBP13.37□□□□□ -0.27
PDCD11-206ENST00000493610 SLC2A4P14672 509 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 MSNP26038 577 aaKnown RBP13.37□□□□□ -0.27
PDCD11-206ENST00000493610 ARNTP27540 789 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 SLC5A2P31639 672 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 AKT1P31749 480 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 COILP38432 576 aaPredicted RBP13.37□□□□□ -0.27
PDCD11-206ENST00000493610 GFERP55789 205 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 PPP1CAP62136 330 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 CACNG1Q06432 222 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 GPR18Q14330 331 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 TRIP13Q15645 432 aaPredicted RBP13.37□□□□□ -0.27
PDCD11-206ENST00000493610 ZRANB3Q5FWF4 1079 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 DUS1LQ6P1R4 473 aaKnown RBP13.37□□□□□ -0.27
PDCD11-206ENST00000493610 AGGF1Q8N302 714 aaeCLIP13.37□□□□□ -0.27
PDCD11-206ENST00000493610 ACTRT1Q8TDG2 376 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 JPH3Q8WXH2 748 aaPredicted RBP13.37□□□□□ -0.27
PDCD11-206ENST00000493610 RSC1A1Q92681 617 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 HDAC10Q969S8 669 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 ZNF514Q96K75 400 aaPredicted RBP13.37□□□□□ -0.27
PDCD11-206ENST00000493610 TTC25Q96NG3 672 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 COPS8Q99627 209 aa13.37□□□□□ -0.27
PDCD11-206ENST00000493610 STRADBQ9C0K7 418 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms