RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 C2P06681 752 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ITGB6P18564 788 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 HK1P19367 917 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 BRCC3P46736 316 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 TKTL1P51854 596 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 MPP1Q00013 466 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 MYL7Q01449 175 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 DEFA5Q01523 94 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ACY1Q03154 408 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 PTPRRQ15256 657 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 MEP1AQ16819 746 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 SMTNL2Q2TAL5 461 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 MSS51Q4VC12 460 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 KLHL26Q53HC5 615 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 CDKL4Q5MAI5 379 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 TMEM198Q66K66 360 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 XAF1Q6GPH4 301 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 FAM171BQ6P995 826 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 BHLHB9Q6PI77 547 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 LINC00299Q6ZSB3 139 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 FAM92BQ6ZTR7 304 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 PPIL6Q8IXY8 311 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 CCDC116Q8IYX3 515 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ATOH1Q92858 354 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ELP4Q96EB1 424 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 GMCL1Q96IK5 515 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 FRMD6Q96NE9 622 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 SEPHS2Q99611 448 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 HTATIP2Q9BUP3 242 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 RHBGQ9H310 441 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 MKNK2Q9HBH9 465 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 PNPLA8Q9NP80 782 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 PAK6Q9NQU5 681 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 AGTPBP1Q9UPW5 1226 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 FNDC1Q4ZHG4 1894 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 E9PAM4 449 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 NFKBIEO00221 500 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 INPP4BO15327 924 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 SRP72O76094 671 aaKnown RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 GCNT3O95395 438 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 WDPCPO95876 746 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 IFNA7P01567 189 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 TNNC2P02585 160 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 NR3C1P04150 777 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 BMP1P13497 986 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 CD1EP15812 388 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 POU3F4P49335 361 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 GCNT1Q02742 428 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 POU5F1BQ06416 359 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 RIN1Q13671 783 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 COTL1Q14019 142 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ANGPT1Q15389 498 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 CCDC85BQ15834 202 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 RFX4Q33E94 735 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 PDZK1Q5T2W1 519 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ANKRD22Q5VYY1 191 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 GLYATQ6IB77 296 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 MAMDC4Q6UXC1 1216 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 CEP68Q76N32 757 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 STRADAQ7RTN6 431 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 SPPL2CQ8IUH8 684 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 TMEM199Q8N511 208 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 CLRN3Q8NCR9 226 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ADAMTS14Q8WXS8 1223 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 BSNDQ8WZ55 320 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 FOXJ1Q92949 421 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 CENPNQ96H22 339 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 TSGA13Q96PP4 275 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ZNF341Q9BYN7 854 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 SLC19A3Q9BZV2 496 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 KAT8Q9H7Z6 458 aaKnown RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 TM9SF3Q9HD45 589 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 TBC1D13Q9NVG8 400 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 VPS28Q9UK41 221 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 VAV3Q9UKW4 847 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 PCNTO95613 3336 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 CCDC78A2IDD5 438 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 LINC00862A6NCI5 91 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 POM121BA6NF01 834 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 SPDYE2BA6NHP3 402 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 KCNU1A8MYU2 1149 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 C9IYK1 514 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 RTCAO00442 366 aaKnown RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 POP4O95707 220 aaKnown RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 FADS2O95864 444 aaKnown RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 GOT2P00505 430 aaKnown RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 LDLRP01130 860 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 CYP3A4P08684 503 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 SPDYE6P0CI01 402 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 BMP2P12643 396 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 HOXA7P31268 230 aaPredicted RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 DPP6P42658 865 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 PPP3CCP48454 512 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 FNTBP49356 437 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 CPT1AP50416 773 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 DEFA6Q01524 100 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 ALKBH1Q13686 389 aaKnown RBP6.78□□□□□ -1.32
VPS13B-205ENST00000493587 EMC2Q15006 297 aa6.78□□□□□ -1.32
VPS13B-205ENST00000493587 CYP51A1Q16850 503 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms