RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ARHGEF17Q96PE2 2063 aaPredicted RBP12.23□□□□□ -0.45
COL6A1-205ENST00000492851 ZNF462Q96JM2 2506 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 CCDC66A2RUB6 948 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 SUV39H1O43463 412 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 TJP3O95049 919 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 CRTAMO95727 393 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 RECKO95980 971 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 TCN2P20062 427 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 FECHP22830 423 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 CSRP3P50461 194 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 DRG2P55039 364 aaKnown RBP12.22□□□□□ -0.45
COL6A1-205ENST00000492851 NAP1L1P55209 391 aaKnown RBP12.22□□□□□ -0.45
COL6A1-205ENST00000492851 ADCY2Q08462 1091 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 KCNAB2Q13303 367 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 GPR18Q14330 331 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 CLCA4Q14CN2 919 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 LLGL1Q15334 1064 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 TAF1AQ15573 450 aaPredicted RBP12.22□□□□□ -0.45
COL6A1-205ENST00000492851 CHRNA6Q15825 494 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.22□□□□□ -0.45
COL6A1-205ENST00000492851 CACHD1Q5VU97 1274 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 METRNLQ641Q3 311 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 TMEM220Q6QAJ8 160 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 C6orf15Q6UXA7 325 aaPredicted RBP12.22□□□□□ -0.45
COL6A1-205ENST00000492851 FAM151BQ6UXP7 276 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 TIPARPQ7Z3E1 657 aaKnown RBP12.22□□□□□ -0.45
COL6A1-205ENST00000492851 KMT5CQ86Y97 462 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 RASGRP3Q8IV61 690 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 CDKL3Q8IVW4 592 aaPredicted RBP12.22□□□□□ -0.45
COL6A1-205ENST00000492851 TXLNBQ8N3L3 684 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 RASGEF1AQ8N9B8 481 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 APOBEC4Q8WW27 367 aaKnown RBP12.22□□□□□ -0.45
COL6A1-205ENST00000492851 OXNAD1Q96HP4 312 aaPredicted RBP12.22□□□□□ -0.45
COL6A1-205ENST00000492851 OR6C1Q96RD1 312 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 PANX2Q96RD6 677 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 CD180Q99467 661 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 HEMGNQ9BXL5 484 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 ULBP3Q9BZM4 244 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 GBA3Q9H227 469 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 APMAPQ9HDC9 416 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 PDE7BQ9NP56 450 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 KCND3Q9UK17 655 aa12.22□□□□□ -0.45
COL6A1-205ENST00000492851 EPN1Q9Y6I3 576 aaPredicted RBP12.22□□□□□ -0.45
COL6A1-205ENST00000492851 LOC101059948A0A1B0GTJ6 334 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 GOLGA6L3A6NEY3 463 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 OR52A4PA6NMU1 304 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 BTNL10A8MVZ5 291 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 UGT1A9O60656 530 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 DLGAP3O95886 979 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 FGF5P12034 268 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 NELFEP18615 380 aaKnown RBP12.21□□□□□ -0.45
COL6A1-205ENST00000492851 UGT1A6P19224 532 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 UGT1A1P22309 533 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 UGT1A4P22310 534 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 RBL1P28749 1068 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 AKT1P31749 480 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 CTNNA1P35221 906 aaKnown RBP12.21□□□□□ -0.45
COL6A1-205ENST00000492851 PTPN7P35236 360 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 HADHAP40939 763 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 STAT5AP42229 794 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 CHRNA4P43681 627 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 GFERP55789 205 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 POLE2P56282 527 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 RWDD2BP57060 319 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 ACY1Q03154 408 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 NOMO1Q15155 1222 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 RPE65Q16518 533 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 KHDC1Q4VXA5 237 aaKnown RBP12.21□□□□□ -0.45
COL6A1-205ENST00000492851 GPRC6AQ5T6X5 926 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 IRGCQ6NXR0 463 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 RANBP10Q6VN20 620 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 PPP1R3BQ86XI6 285 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 CARFQ8N187 725 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 SEC14L1Q92503 715 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 ULK4Q96C45 1275 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 STAMBPL1Q96FJ0 436 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 DCUN1D1Q96GG9 259 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 CCM2Q9BSQ5 444 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 OSBPL8Q9BZF1 889 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 ASB8Q9H765 288 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 UGT1A7Q9HAW7 530 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 UGT1A10Q9HAW8 530 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 UGT1A8Q9HAW9 530 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 SEMA5BQ9P283 1151 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 TRIM10Q9UDY6 481 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 IL17BQ9UHF5 180 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 PADI1Q9ULC6 663 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 KCTD3Q9Y597 815 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 RPS6KL1Q9Y6S9 549 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 COLEC10Q9Y6Z7 277 aa12.21□□□□□ -0.45
COL6A1-205ENST00000492851 GOLGA6L9A6NEM1 432 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 MGAT4DA6NG13 374 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 OR2AG2A6NM03 316 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 CFAP99D6REC4 459 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 NKX2-8O15522 239 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 SRP72O76094 671 aaKnown RBP12.2□□□□□ -0.46
COL6A1-205ENST00000492851 NDUFA10O95299 355 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 PRAMEF1O95521 474 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 AGTP01019 485 aa12.2□□□□□ -0.46
COL6A1-205ENST00000492851 PTMAP06454 111 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms