RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 VIPP01282 170 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 FTLP02792 175 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 MT-ND3P03897 115 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 LPOP22079 712 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 CES1P23141 567 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 IL4RP24394 825 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 SERPINB6P35237 376 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 NIPAL4Q0D2K0 466 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 FOXD4Q12950 439 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 VWA5B1Q5TIE3 1220 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 CACHD1Q5VU97 1274 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 IGFL3Q6UXB1 125 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 MRGPRGQ86SM5 289 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 LRRC49Q8IUZ0 686 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 LPCAT1Q8NF37 534 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 MAML1Q92585 1016 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 INPP5DQ92835 1189 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 EID2BQ96D98 161 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 AGAP3Q96P47 875 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 ILKAPQ9H0C8 392 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 BRD8Q9H0E9 1235 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 OSGEPL1Q9H4B0 414 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 PCDH9Q9HC56 1237 aa11.47□□□□□ -0.57
CACNA1C-228ENST00000492150 RGSL1A5PLK6 1076 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 CHUKO15111 745 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 MATN3O15232 486 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 GZMAP12544 262 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 BRAFP15056 766 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 NELFEP18615 380 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 CAPZBP47756 277 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 RPL26P61254 145 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 RPS18P62269 152 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 MMRN1Q13201 1228 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 LAMB3Q13751 1172 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 QPCTQ16769 361 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 DCAF10Q5QP82 559 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 PWWP2BQ6NUJ5 590 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 MTFR2Q6P444 385 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 FAM199XQ6PEV8 388 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 FAM92BQ6ZTR7 304 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 ZNF571Q7Z3V5 609 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 ADGRG6Q86SQ4 1221 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 PPP1R3BQ86XI6 285 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 TRIM48Q8IWZ4 208 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 TEKT4Q8WW24 435 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 ZNF653Q96CK0 615 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 ARSGQ96EG1 525 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 SPOCK3Q9BQ16 436 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 TRIM39Q9HCM9 518 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 RBM22Q9NW64 420 aaKnown RBP eCLIP11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 PKD2L2Q9NZM6 624 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 SEMA5BQ9P283 1151 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 SUCOQ9UBS9 1254 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 EPHA6Q9UF33 1036 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 MYO6Q9UM54 1294 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 RPL26L1Q9UNX3 145 aaKnown RBP11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 SCINQ9Y6U3 715 aa11.46□□□□□ -0.57
CACNA1C-228ENST00000492150 IGHV5-51A0A0C4DH38 117 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 DDX3XO00571 662 aaKnown RBP eCLIP11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 FANCGO15287 622 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 MFSD11O43934 449 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 MMP2P08253 660 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 FOLR1P15328 257 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 ZNF7P17097 686 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 PTPN4P29074 926 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 HNRNPH3P31942 346 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 PTGIRP43119 386 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 ZNF165P49910 485 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 PPP1CAP62136 330 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 GALNT2Q10471 571 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 IL10RAQ13651 578 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 GPR18Q14330 331 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 SEPT7Q16181 437 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 PLA2G4EQ3MJ16 856 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 TDRD12Q587J7 1177 aaKnown RBP11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 ANKRD20A8PQ5CZ79 823 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 LYPLAL1Q5VWZ2 237 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 E4F1Q66K89 784 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 IRGCQ6NXR0 463 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 XKRXQ6PP77 449 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 CRTC3Q6UUV7 619 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 ABRAXAS1Q6UWZ7 409 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 ACBD4Q8NC06 268 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 GPR26Q8NDV2 337 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 LRRN4Q8WUT4 740 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 ZDHHC12Q96GR4 267 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 SLC41A2Q96JW4 573 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 MLPHQ9BV36 600 aaPredicted RBP11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 RAB33BQ9H082 229 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 HSD3B7Q9H2F3 369 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 HAUS4Q9H6D7 363 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 SLC40A1Q9NP59 571 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 MYO1AQ9UBC5 1043 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 AMACRQ9UHK6 382 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 DNAJC16Q9Y2G8 782 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 TTLL3Q9Y4R7 772 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 PCDHGB6Q9Y5F9 930 aa11.45□□□□□ -0.58
CACNA1C-228ENST00000492150 LRRC53A6NM62 1247 aa11.44□□□□□ -0.58
CACNA1C-228ENST00000492150 OR52A4PA6NMU1 304 aa11.44□□□□□ -0.58
CACNA1C-228ENST00000492150 PDZK1P1A8MUH7 402 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms