RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 TXNDC15Q96J42 360 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 NUAK1O60285 661 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 CRCPO75575 148 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 SLC4A1P02730 911 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 ANXA6P08133 673 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 MTHFD2P13995 350 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 IRF5Q13568 498 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 OR4D1Q15615 310 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 ANKRD34AQ69YU3 496 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 ARHGAP12Q8IWW6 846 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 BTBD2Q9BX70 525 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 HOXD1Q9GZZ0 328 aa19.13■□□□□ 0.65
SNAPC3-206ENST00000490969 FAM92AA1XBS5 289 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 TTC34A8MYJ7 566 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 MATN3O15232 486 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 MAFKO60675 156 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 S1PR4O95977 384 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 USP17L7P0C7H9 530 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 DARSP14868 501 aaKnown RBP19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 CXCR3P49682 368 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 TAF6P49848 677 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 NOGQ13253 232 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 ACOX1Q15067 660 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 DEFB115Q30KQ5 88 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 LIMS2Q7Z4I7 341 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 GALNT7Q86SF2 657 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 EDEM1Q92611 657 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 RORBQ92753 470 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 SP140LQ9H930 580 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 RGS18Q9NS28 235 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 RBM22Q9NW64 420 aaKnown RBP eCLIP19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 COMMD8Q9NX08 183 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 TIMM22Q9Y584 194 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 SCN10AQ9Y5Y9 1956 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 RECQL4O94761 1208 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 F9P00740 461 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 CD4P01730 458 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 LCP2Q13094 533 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 SLC13A2Q13183 592 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 CARTPTQ16568 116 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 CATSPEREQ5SY80 951 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 ALKAL1Q6UXT8 129 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 Q8N9G6 341 aaPredicted RBP19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 OR6P1Q8NGX9 317 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 PSMA8Q8TAA3 256 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 PABPC5Q96DU9 382 aaKnown RBP19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 PPP1R2P1Q96PQ5 205 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 BRINP2Q9C0B6 783 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 NXF3Q9H4D5 531 aaKnown RBP19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 EXD2Q9NVH0 621 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 USE1Q9NZ43 259 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 CRYL1Q9Y2S2 319 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 Q9Y3F1 56 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 PCDHGB1Q9Y5G3 927 aa19.12■□□□□ 0.65
SNAPC3-206ENST00000490969 CCL22O00626 93 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 SEC24AO95486 1093 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 NPPAP01160 153 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 IL12AP29459 219 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 GRK3P35626 688 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 PPP5CP53041 499 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 WNT3AP56704 352 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 SELPLGQ14242 412 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 SLC27A1Q6PCB7 646 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 GPRIN1Q7Z2K8 1008 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 P2RY8Q86VZ1 359 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 MMAAQ8IVH4 418 aaKnown RBP19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 FAM86B1Q8N7N1 296 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 CAPSLQ8WWF8 208 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 DACH2Q96NX9 599 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 RNF39Q9H2S5 420 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 CARS2Q9HA77 564 aaKnown RBP19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 GOLGA2P5Q9HBQ8 144 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 SEMA4BQ9NPR2 832 aaPredicted RBP19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 TRPV5Q9NQA5 729 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 DNAJB9Q9UBS3 223 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 EVLQ9UI08 416 aaPredicted RBP19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 LOC100130705A0A1B0GUX0 176 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 C17orf102A2RUQ5 167 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 SYCE1LA8MT33 242 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 CCDC159P0C7I6 412 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 FSHRP23945 695 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 AKAP5P24588 427 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 NKX2-5P52952 324 aaPredicted RBP19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 MTPNP58546 118 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 LACC1Q8IV20 430 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 RHOXF1Q8NHV9 184 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 HTRA1Q92743 480 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 YIPF6Q96EC8 236 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 PPM1MQ96MI6 270 aa19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 ZNF300Q96RE9 604 aaPredicted RBP19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 RBM4BQ9BQ04 359 aaKnown RBP19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 RBM4Q9BWF3 364 aaKnown RBP19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 MARCH4Q9P2E8 410 aaPredicted RBP19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 INTS6Q9UL03 887 aaKnown RBP19.11■□□□□ 0.65
SNAPC3-206ENST00000490969 FAM234BA2RU67 622 aa19.1■□□□□ 0.65
SNAPC3-206ENST00000490969 NDUFB5O43674 189 aa19.1■□□□□ 0.65
SNAPC3-206ENST00000490969 XPNPEP2O43895 674 aa19.1■□□□□ 0.65
SNAPC3-206ENST00000490969 CST1P01037 141 aa19.1■□□□□ 0.65
SNAPC3-206ENST00000490969 GGT1P19440 569 aa19.1■□□□□ 0.65
SNAPC3-206ENST00000490969 WARSP23381 471 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms