RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	ACTN1	P12814	892 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	GNAZ	P19086	355 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	ALDH4A1	P30038	563 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	CHRNB4	P30926	498 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	CAMP	P49913	170 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	MVP	Q14764	893 aa	Known RBP	3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	TMEM30B	Q3MIR4	351 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	CCDC30	Q5VVM6	783 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	ZDHHC20	Q5W0Z9	365 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	ARHGAP17	Q68EM7	881 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	JADE1	Q6IE81	842 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	FBXL22	Q6P050	247 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	TMEM154	Q6P9G4	183 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	CFAP77	Q6ZQR2	320 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	C15orf39	Q6ZRI6	1047 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	TPRG1	Q6ZUI0	275 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	ZNF534	Q76KX8	674 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	PTOV1	Q86YD1	416 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	TICAM1	Q8IUC6	712 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	WDSUB1	Q8N9V3	476 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	TAS1R2	Q8TE23	839 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	ZNF473	Q8WTR7	871 aa	Known RBP	3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	SCFD2	Q8WU76	684 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	HDAC2	Q92769	488 aa	Known RBP	3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	SEMA4D	Q92854	862 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	MOAP1	Q96BY2	351 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	DDO	Q99489	341 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	RBM4	Q9BWF3	364 aa	Known RBP	3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	BARHL1	Q9BZE3	327 aa		3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	ZBTB20	Q9HC78	741 aa	Predicted RBP	3.9	□□□□□ -1.79
PHC3-212	ENST00000490723	OR2M5	A3KFT3	312 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	TMEM8B	A6NDV4	472 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	PGPEP1L	A6NFU8	196 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723		A8MZ25	164 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	CLIC2	O15247	247 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	USO1	O60763	962 aa	Known RBP	3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	TPPP	O94811	219 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	SCGB1D1	O95968	90 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	SERPINB2	P05120	415 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	EPHA2	P29317	976 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	MAPK4	P31152	587 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	MMP15	P51511	669 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	CDH8	P55286	799 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	ERVK11-1	P61568	191 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	SPOCK1	Q08629	439 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	DDX10	Q13206	875 aa	Known RBP	3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	CRYM	Q14894	314 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	CCDC6	Q16204	474 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	C14orf177	Q52M58	125 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	LCE1E	Q5T753	118 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	RSRC2	Q7L4I2	434 aa	Known RBP	3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	MAATS1	Q7Z4T9	603 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	GALNT13	Q8IUC8	556 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	ANKRD52	Q8NB46	1076 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	ZNF248	Q8NDW4	579 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	CTCFL	Q8NI51	663 aa	Predicted RBP	3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	LGALS12	Q96DT0	336 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	SRSF8	Q9BRL6	282 aa	Known RBP	3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	DNAJC18	Q9H819	358 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	MBNL1	Q9NR56	388 aa	Known RBP	3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	SEPT11	Q9NVA2	429 aa	Known RBP	3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	TRMT1	Q9NXH9	659 aa	Known RBP	3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	OGFR	Q9NZT2	677 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	FBXL17	Q9UF56	701 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	PNMA2	Q9UL42	364 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	KCNK7	Q9Y2U2	307 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	C2CD2	Q9Y426	696 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	CMAHP	Q9Y471	501 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	LYVE1	Q9Y5Y7	322 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723	KIAA1210	Q9ULL0	1709 aa		3.89	□□□□□ -1.79
PHC3-212	ENST00000490723		A0A0G2JLW4	131 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	PI4KAP2	A4QPH2	592 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	OR2C1	O95371	312 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	GCNT3	O95395	438 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	TSHB	P01222	138 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	ACADM	P11310	421 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	SELL	P14151	372 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	NR2C2	P49116	596 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	HSD17B4	P51659	736 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	RARS2	Q5T160	578 aa	Known RBP	3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	KRTAP5-11	Q6L8G4	156 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	FAM180B	Q6P0A1	224 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	CHST9	Q7L1S5	443 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	ARID3B	Q8IVW6	561 aa	Predicted RBP	3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	SMPDL3B	Q92485	455 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	HGH1	Q9BTY7	390 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	MOV10L1	Q9BXT6	1211 aa	Known RBP	3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	DENND2D	Q9H6A0	471 aa	Predicted RBP	3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	EIF2B3	Q9NR50	452 aa	Known RBP	3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	PAG1	Q9NWQ8	432 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	MIOS	Q9NXC5	875 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	DNAJB4	Q9UDY4	337 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	ACAD8	Q9UKU7	415 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	FLT1	P17948	1338 aa		3.88	□□□□□ -1.79
PHC3-212	ENST00000490723	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	3.87	□□□□□ -1.79
PHC3-212	ENST00000490723	HHLA1	C9JL84	531 aa		3.87	□□□□□ -1.79
PHC3-212	ENST00000490723	PLOD2	O00469	737 aa		3.87	□□□□□ -1.79
PHC3-212	ENST00000490723	LDLR	P01130	860 aa		3.87	□□□□□ -1.79
PHC3-212	ENST00000490723	GH2	P01242	217 aa		3.87	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms