RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 ACSS2Q9NR19 701 aa11.55□□□□□ -0.56
FDPS-215ENST00000490140 SEMA5BQ9P283 1151 aa11.55□□□□□ -0.56
FDPS-215ENST00000490140 SLC23A2Q9UGH3 650 aa11.55□□□□□ -0.56
FDPS-215ENST00000490140 CAPN11Q9UMQ6 739 aa11.55□□□□□ -0.56
FDPS-215ENST00000490140 DNMT3AQ9Y6K1 912 aaPredicted RBP11.55□□□□□ -0.56
FDPS-215ENST00000490140 SPENQ96T58 3664 aaKnown RBP11.55□□□□□ -0.56
FDPS-215ENST00000490140 ICE1Q9Y2F5 2266 aa11.55□□□□□ -0.56
FDPS-215ENST00000490140 PIRTP0C851 137 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 BRAFP15056 766 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 KDELR1P24390 212 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 SPAM1P38567 509 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 NR2C2P49116 596 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 XRCC4Q13426 336 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 CHRNA6Q15825 494 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 PPP2R5EQ16537 467 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 LONRF2Q1L5Z9 754 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 ATP13A4Q4VNC1 1196 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 ZNF648Q5T619 568 aaPredicted RBP11.54□□□□□ -0.56
FDPS-215ENST00000490140 TMEM126BQ8IUX1 230 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 ZNF547Q8IVP9 402 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 CNTD1Q8N815 330 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 ZFPM2Q8WW38 1151 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 NAP1L5Q96NT1 182 aaPredicted RBP11.54□□□□□ -0.56
FDPS-215ENST00000490140 DEF6Q9H4E7 631 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 FGF21Q9NSA1 209 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 CUEDC1Q9NWM3 386 aaPredicted RBP11.54□□□□□ -0.56
FDPS-215ENST00000490140 PKP3Q9Y446 797 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 ZNF451Q9Y4E5 1061 aa11.54□□□□□ -0.56
FDPS-215ENST00000490140 GOLGA6L19H0YKK7 550 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 MATN2O00339 956 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 KIF1CO43896 1103 aaKnown RBP11.53□□□□□ -0.56
FDPS-215ENST00000490140 DPM1O60762 260 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 MTX2O75431 263 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 SCRG1O75711 98 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 ZBTB11O95625 1053 aaPredicted RBP11.53□□□□□ -0.56
FDPS-215ENST00000490140 NR1D1P20393 614 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 ARHGAP25P42331 645 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 RRADP55042 308 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 UBASH3AP57075 661 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 SLC10A2Q12908 348 aaPredicted RBP11.53□□□□□ -0.56
FDPS-215ENST00000490140 PRKAA1Q13131 559 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 ATP13A5Q4VNC0 1218 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 SLC9A4Q6AI14 798 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 PWWP2BQ6NUJ5 590 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 GLT6D1Q7Z4J2 308 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 PLD5Q8N7P1 536 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 DDHD1Q8NEL9 900 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 SSC4DQ8WTU2 575 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 CPT1BQ92523 772 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 EID2BQ96D98 161 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 SYTL2Q9HCH5 934 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 LATS2Q9NRM7 1088 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 IMP3Q9NV31 184 aaKnown RBP11.53□□□□□ -0.56
FDPS-215ENST00000490140 SOHLH2Q9NX45 425 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 DDX56Q9NY93 547 aaKnown RBP11.53□□□□□ -0.56
FDPS-215ENST00000490140 TRIM10Q9UDY6 481 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 PLEKHB1Q9UF11 243 aaPredicted RBP11.53□□□□□ -0.56
FDPS-215ENST00000490140 FAM153AQ9UHL3 310 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 SNX7Q9UNH6 387 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.53□□□□□ -0.561e-9■□□□□ 8.1
FDPS-215ENST00000490140 UTP20O75691 2785 aaKnown RBP11.53□□□□□ -0.56
FDPS-215ENST00000490140 ESPL1Q14674 2120 aa11.53□□□□□ -0.56
FDPS-215ENST00000490140 IGHV5-51A0A0C4DH38 117 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 GLYATL1P3A0A0U1RQE8 302 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 OR5K3A6NET4 321 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 KLHL41O60662 606 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 PMPCBO75439 489 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 EPOP01588 193 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 KRT1P04264 644 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 FURINP09958 794 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 SLC35G4P0C7Q5 338 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 MTHFD1P11586 935 aaKnown RBP11.52□□□□□ -0.57
FDPS-215ENST00000490140 NDUFS1P28331 727 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 AKT1P31749 480 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 TAS2R40P59535 323 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 TFDP2Q14188 446 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 SLC18A3Q16572 532 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 TEX44Q53QW1 395 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 LRRC38Q5VT99 294 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 IZUMO3Q5VZ72 239 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 PAPD7Q5XG87 772 aaKnown RBP11.52□□□□□ -0.57
FDPS-215ENST00000490140 CAPRIN2Q6IMN6 1127 aaKnown RBP11.52□□□□□ -0.57
FDPS-215ENST00000490140 C11orf96Q7Z7L8 435 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 RFX6Q8HWS3 928 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 LURAP1LQ8IV03 231 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 RHOT2Q8IXI1 618 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 D2HGDHQ8N465 521 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 CPLX3Q8WVH0 158 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 RAPGEF5Q92565 580 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 MR1Q95460 341 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 TADA1Q96BN2 335 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 LRFN5Q96NI6 719 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 OLFM3Q96PB7 478 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 VAT1Q99536 393 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 FERMT1Q9BQL6 677 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 FSD1LQ9BXM9 530 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 CEP41Q9BYV8 373 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 ING2Q9H160 280 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 GLOD4Q9HC38 313 aa11.52□□□□□ -0.57
FDPS-215ENST00000490140 KCND1Q9NSA2 647 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms