RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 IL17REQ8NFR9 667 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 RFFLQ8WZ73 363 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 SLC47A1Q96FL8 570 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 POM121L2Q96KW2 1035 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 ATOH8Q96SQ7 321 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 PYGO2Q9BRQ0 406 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 BARHL2Q9NY43 387 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 CACNG5Q9UF02 275 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 RASAL2Q9UJF2 1139 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 B3GALT5Q9Y2C3 310 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 R3HDM2Q9Y2K5 976 aaKnown RBP3.41□□□□□ -1.86
HMGN1-218ENST00000490032 SMAD5-AS1Q9Y6J3 95 aa3.41□□□□□ -1.86
HMGN1-218ENST00000490032 FAM237BA0A1B0GVD1 139 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 TMEM8BA6NDV4 472 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 SH2B2O14492 632 aaPredicted RBP3.4□□□□□ -1.87
HMGN1-218ENST00000490032 GPR137BO60478 399 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 EIF3JO75822 258 aaKnown RBP3.4□□□□□ -1.87
HMGN1-218ENST00000490032 TMEM63AO94886 807 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 CSPG5O95196 566 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 GCNT3O95395 438 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 EML2O95834 649 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 HIST1H2ABP04908 130 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 FAM157CP0CG43 387 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 HIST1H2ADP20671 130 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 CCR9P51686 369 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 GPR143P51810 404 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 CD81P60033 236 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 TBCEQ15813 527 aaPredicted RBP3.4□□□□□ -1.87
HMGN1-218ENST00000490032 PCGF3Q3KNV8 242 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 FAAP20Q6NZ36 180 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 SH2D5Q6ZV89 423 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 STXBP4Q6ZWJ1 553 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 HIST3H2AQ7L7L0 130 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 PLD3Q8IV08 490 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 CEP97Q8IW35 865 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 FRMD1Q8N878 549 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 ZNF689Q96CS4 500 aaPredicted RBP3.4□□□□□ -1.87
HMGN1-218ENST00000490032 EGFL8Q99944 293 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 ZNF71Q9NQZ8 489 aaPredicted RBP3.4□□□□□ -1.87
HMGN1-218ENST00000490032 COQ3Q9NZJ6 369 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 DBNLQ9UJU6 430 aaKnown RBP3.4□□□□□ -1.87
HMGN1-218ENST00000490032 PYGO1Q9Y3Y4 419 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 STK36Q9NRP7 1315 aa3.4□□□□□ -1.87
HMGN1-218ENST00000490032 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 MEIOCA2RUB1 952 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 SLCO1B7G3V0H7 640 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 J3QR06 171 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 PLK4O00444 970 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 TMCC2O75069 709 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 ZFAND5O76080 213 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 CCNDBP1O95273 360 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 EIF2S1P05198 315 aaKnown RBP3.39□□□□□ -1.87
HMGN1-218ENST00000490032 ATP1A3P13637 1013 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 CDH2P19022 906 aaPredicted RBP3.39□□□□□ -1.87
HMGN1-218ENST00000490032 PSMA4P25789 261 aaKnown RBP3.39□□□□□ -1.87
HMGN1-218ENST00000490032 PIK3CAP42336 1068 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 THOP1P52888 689 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 LMO4P61968 165 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 GAGE2BQ13066 116 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 GAGE2EQ4V326 116 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 FFAR4Q5NUL3 377 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 INTS11Q5TA45 600 aaKnown RBP3.39□□□□□ -1.87
HMGN1-218ENST00000490032 GAGE2AQ6NT46 116 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 NCEH1Q6PIU2 408 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 GPALPP1Q8IXQ4 340 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 GSDMBQ8TAX9 411 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 ARHGEF2Q92974 986 aaKnown RBP3.39□□□□□ -1.87
HMGN1-218ENST00000490032 RTP3Q9BQQ7 232 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 RHNO1Q9BSD3 238 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 CDK19Q9BWU1 502 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 WDR13Q9H1Z4 485 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 SEMA6AQ9H2E6 1030 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 RRP7BPQ9NSQ0 103 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 INTS10Q9NVR2 710 aaKnown RBP3.39□□□□□ -1.87
HMGN1-218ENST00000490032 GAGE2DQ9UEU5 116 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 TSPYL4Q9UJ04 414 aa3.39□□□□□ -1.87
HMGN1-218ENST00000490032 MRPS28Q9Y2Q9 187 aaKnown RBP3.39□□□□□ -1.87
HMGN1-218ENST00000490032 A0A0J9YWU9 116 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 H3BQ06 376 aaPredicted RBP3.38□□□□□ -1.87
HMGN1-218ENST00000490032 TMEM189-UBE2V1I3L0A0 370 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 PLOD2O00469 737 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 OGG1O15527 345 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 ZBTB43O43298 467 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 ACTN1P12814 892 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 ANXA7P20073 488 aaKnown RBP3.38□□□□□ -1.87
HMGN1-218ENST00000490032 HOXC13P31276 330 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 WNT5AP41221 380 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 MSH2P43246 934 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 GALCP54803 685 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 RPS3AP61247 264 aaKnown RBP3.38□□□□□ -1.87
HMGN1-218ENST00000490032 UBE2V1Q13404 147 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 ADAMTSL4-AS1Q5T5F5 129 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 ALS2CLQ60I27 953 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 ACSM2BQ68CK6 577 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 FASTKD5Q7L8L6 764 aaKnown RBP3.38□□□□□ -1.87
HMGN1-218ENST00000490032 ISCA2Q86U28 154 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 ZNF440Q8IYI8 595 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 LYG1Q8N1E2 194 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 L3MBTL4Q8NA19 623 aa3.38□□□□□ -1.87
HMGN1-218ENST00000490032 HJURPQ8NCD3 748 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms