RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 HLA-DRAP01903 254 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 C1QBP02746 253 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ALPLP05186 524 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PRKCBP05771 671 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CHRNGP07510 517 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SUPT20HL2P0C7V6 817 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 IL7RP16871 459 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 NFKB1P19838 968 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ACO1P21399 889 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 LRPAP1P30533 357 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CDH5P33151 784 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 RYKP34925 604 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TRIM23P36406 574 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC15A1P46059 708 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ATP5OP48047 213 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CDK8P49336 464 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ATP4BP51164 291 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ARSFP54793 590 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SLC12A2P55011 1212 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 OGDHQ02218 1023 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MVKQ03426 396 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 EFR3AQ14156 821 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TFDP2Q14188 446 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF267Q14586 743 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 NOMO1Q15155 1222 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PSMD5Q16401 504 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CA9Q16790 459 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CYP51A1Q16850 503 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 UGP2Q16851 508 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 IMPG1Q17R60 797 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 C21orf62-AS1Q17RA5 79 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 LRRC26Q2I0M4 334 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ALFQ53S48 1182 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 BRDTQ58F21 947 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 WDR44Q5JSH3 913 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 LIPMQ5VYY2 423 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 DENND5AQ6IQ26 1287 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MRPL14Q6P1L8 145 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CORO6Q6QEF8 472 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ADAMTSL4Q6UY14 1074 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZNF704Q6ZNC4 412 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 DBX2Q6ZNG2 339 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM196AQ6ZSG2 479 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 C16orf86Q6ZW13 317 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 KCTD1Q719H9 257 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 EFL1Q7Z2Z2 1120 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 LIMS2Q7Z4I7 341 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 NRARPQ7Z6K4 114 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CLEC14AQ86T13 490 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM83AQ86UY5 434 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 GPALPP1Q8IXQ4 340 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MICU2Q8IYU8 434 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 TAGAPQ8N103 731 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MINDY1Q8N5J2 469 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 KDM1BQ8NB78 822 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 KCT2Q8NC54 265 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 KCTD6Q8NC69 237 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ZMIZ2Q8NF64 920 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PJA1Q8NG27 643 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 OR4M2Q8NGB6 313 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 OR4M1Q8NGD0 313 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 AGR3Q8TD06 166 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PPP1R13LQ8WUF5 828 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 LENG9Q96B70 501 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 INTS12Q96CB8 462 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ACSF2Q96CM8 615 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MFSD3Q96ES6 412 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM84BQ96KN1 310 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PPP1R36Q96LQ0 422 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SAMD11Q96NU1 681 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 NECAB3Q96P71 396 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 GTPBP2Q9BX10 602 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FAM126AQ9BYI3 521 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CCDC90BQ9GZT6 254 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 SDCBP2Q9H190 292 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 ST6GALNAC4Q9H4F1 302 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 NMRAL1Q9HBL8 299 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 RANGRFQ9HD47 186 aaPredicted RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 FANCFQ9NPI8 374 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CHRAC1Q9NRG0 131 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 C1orf112Q9NSG2 853 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PGAP2Q9UHJ9 254 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 PFDN2Q9UHV9 154 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 INTS6Q9UL03 887 aaKnown RBP4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 NDUFAF1Q9Y375 327 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 MSRB2Q9Y3D2 182 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 STON1Q9Y6Q2 735 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 CDK5RAP2Q96SN8 1893 aa4.72□□□□□ -1.65
SNRNP40-206ENST00000489853 KIAA1551Q9HCM1 1747 aa4.71□□□□□ -1.65
SNRNP40-206ENST00000489853 TCRBV5S2A0A599 114 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 BCLAF3A2AJT9 711 aaKnown RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 PRSS44E7EML9 344 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 H3BQ06 376 aaPredicted RBP4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 I3L521 148 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 K7ENM7 598 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 SLC1A7O00341 560 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 NME4O00746 187 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 ARPC2O15144 300 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 LRCH4O75427 683 aa4.71□□□□□ -1.66
SNRNP40-206ENST00000489853 PRSS23O95084 383 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms