RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 FZD3Q9NPG1 666 aa20.57■□□□□ 0.88
SND1-214ENST00000489417 PHPT1Q9NRX4 125 aaPredicted RBP20.57■□□□□ 0.88
SND1-214ENST00000489417 ATXN10Q9UBB4 475 aa20.57■□□□□ 0.88
SND1-214ENST00000489417 TRPM6Q9BX84 2022 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 TARM1B6A8C7 271 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 C10orf142B7Z368 130 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 G3V2L1 256 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 KPNA5O15131 536 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 MYL2P10916 166 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 DGKAP23743 735 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 AOAHP28039 575 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 CD6P30203 668 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 ALDH3A1P30838 453 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 SIGLEC14Q08ET2 396 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 ACSBG2Q5FVE4 666 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 ZYG11AQ6WRX3 759 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 ISCA2Q86U28 154 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 TRIM42Q8IWZ5 723 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 BEND7Q8N7W2 519 aaPredicted RBP20.56■□□□□ 0.88
SND1-214ENST00000489417 LRRC8CQ8TDW0 803 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 PTERQ96BW5 349 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 PDLIM5Q96HC4 596 aaKnown RBP20.56■□□□□ 0.88
SND1-214ENST00000489417 ZNF514Q96K75 400 aaPredicted RBP20.56■□□□□ 0.88
SND1-214ENST00000489417 WSB2Q9NYS7 404 aaPredicted RBP20.56■□□□□ 0.88
SND1-214ENST00000489417 SIRPGQ9P1W8 387 aa20.56■□□□□ 0.88
SND1-214ENST00000489417 SRRM3A6NNA2 597 aaPredicted RBP20.55■□□□□ 0.88
SND1-214ENST00000489417 CBSLP0DN79 551 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 TAC1P20366 129 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 BGNP21810 368 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 CBSP35520 551 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 CCR5P51681 352 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 KIAA0895LQ68EN5 471 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 NAPRTQ6XQN6 538 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 RGS9BPQ6ZS82 235 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 CAMKK1Q8N5S9 505 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 ELMO1Q92556 727 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 ZNF75CPQ92670 426 aaPredicted RBP20.55■□□□□ 0.88
SND1-214ENST00000489417 KIAA1191Q96A73 305 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 MYOCQ99972 504 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 CCM2Q9BSQ5 444 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 C6orf106Q9H6K1 298 aaPredicted RBP20.55■□□□□ 0.88
SND1-214ENST00000489417 TMEM98Q9Y2Y6 226 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 OR1A2Q9Y585 309 aa20.55■□□□□ 0.88
SND1-214ENST00000489417 IGHV1OR15-9A0A0B4J2B8 117 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 NPEPPSL1A6NEC2 478 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 TCP11X1B4DZS4 312 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 EIF3FO00303 357 aaPredicted RBP20.54■□□□□ 0.88
SND1-214ENST00000489417 LATO43561 262 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 RRP9O43818 475 aaKnown RBP20.54■□□□□ 0.88
SND1-214ENST00000489417 LILRB5O75023 590 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 ZNF8P17098 575 aaPredicted RBP20.54■□□□□ 0.88
SND1-214ENST00000489417 KCNA4P22459 653 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 HNRNPA2B1P22626 353 aaKnown RBP20.54■□□□□ 0.88
SND1-214ENST00000489417 MAGEA9P43362 315 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 CXCL12P48061 93 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 GBX1Q14549 363 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 OR4D1Q15615 310 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 PLEKHS1Q5SXH7 462 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 CWF19L1Q69YN2 538 aaKnown RBP20.54■□□□□ 0.88
SND1-214ENST00000489417 DOK6Q6PKX4 331 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 TRAPPC5Q8IUR0 188 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 C10orf107Q8IVU9 208 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 MYO1HQ8N1T3 1032 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 RHEBL1Q8TAI7 183 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 EDAQ92838 391 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 FOXJ1Q92949 421 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 FUBP1Q96AE4 644 aaKnown RBP20.54■□□□□ 0.88
SND1-214ENST00000489417 CHMP6Q96FZ7 201 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 LGR4Q9BXB1 951 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 MANSC1Q9H8J5 431 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 IKZF3Q9UKT9 509 aa20.54■□□□□ 0.88
SND1-214ENST00000489417 CCDC189A1A4V9 331 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 GMNCA6NCL1 334 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 CDC7O00311 574 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 BTN3A1O00481 513 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 FPGTO14772 594 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 MYCLP1P12525 358 aaPredicted RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 ENO3P13929 434 aaPredicted RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 SEC24CP53992 1094 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 BOP1Q14137 746 aaKnown RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 CHI3L2Q15782 390 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 PIWIL4Q7Z3Z4 852 aaKnown RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 RAB3IL1Q8TBN0 382 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 RLN3Q8WXF3 142 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 ZNF317Q96PQ6 595 aaPredicted RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 APOOQ9BUR5 198 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 GPR174Q9BXC1 333 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 EPN3Q9H201 632 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 TSR3Q9UJK0 312 aaKnown RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 GPR34Q9UPC5 381 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 DLX3O60479 287 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 KERAO60938 352 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 FSBPO95073 299 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 IGHV4-34P06331 123 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 VIMP08670 466 aaKnown RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 GSTM1P09488 218 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 FGF3P11487 239 aaPredicted RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 ATP5F1P24539 256 aaPredicted RBP20.53■□□□□ 0.88
SND1-214ENST00000489417 AKT2P31751 481 aa20.53■□□□□ 0.88
SND1-214ENST00000489417 KCNC1P48547 511 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms