RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 INPP5DQ92835 1189 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 SGSM3Q96HU1 749 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 LRFN5Q96NI6 719 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 BARD1Q99728 777 aaKnown RBP15.82■□□□□ 0.12
USP48-210ENST00000489108 SYT11Q9BT88 431 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 ZSCAN5AQ9BUG6 496 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 PCDH18Q9HCL0 1135 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 PDZD2O15018 2839 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 SEC16AO15027 2179 aa15.82■□□□□ 0.12
USP48-210ENST00000489108 TLCD2A6NGC4 264 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 DDX3YO15523 660 aaKnown RBP15.81■□□□□ 0.12
USP48-210ENST00000489108 LRRTM2O43300 516 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 FERP16591 822 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 CA5AP35218 305 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 HALP42357 657 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 UBE2HP62256 183 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 CDKAL1Q5VV42 579 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 KLHL35Q6PF15 583 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 FBXO38Q6PIJ6 1188 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 C11orf96Q7Z7L8 435 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 MCEMP1Q8IX19 187 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 TRAM1L1Q8N609 369 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 OR8K5Q8NH50 307 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 LRRN4Q8WUT4 740 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 CD180Q99467 661 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 NUP85Q9BW27 656 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 ILKAPQ9H0C8 392 aaPredicted RBP15.81■□□□□ 0.12
USP48-210ENST00000489108 ZFYVE1Q9HBF4 777 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 SHOC2Q9UQ13 582 aa15.81■□□□□ 0.12
USP48-210ENST00000489108 CCDC88CQ9P219 2028 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 VEGFDO43915 354 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 FTLP02792 175 aaPredicted RBP15.8■□□□□ 0.12
USP48-210ENST00000489108 HLA-DQB2P05538 268 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 MMP2P08253 660 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 MMRN1Q13201 1228 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 PLCL1Q15111 1095 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 RPE65Q16518 533 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 LYPLAL1Q5VWZ2 237 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 HGSNATQ68CP4 663 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 PPP1R2P3Q6NXS1 205 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 ENOX1Q8TC92 643 aaKnown RBP15.8■□□□□ 0.12
USP48-210ENST00000489108 CPT1BQ92523 772 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 CLIP3Q96DZ5 547 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 CLSTN2Q9H4D0 955 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 LATS2Q9NRM7 1088 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 HRASLS2Q9NWW9 162 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 TMEM63CQ9P1W3 806 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 MYO1AQ9UBC5 1043 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 AMACRQ9UHK6 382 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 TMPRSS11EQ9UL52 423 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 PSMD13Q9UNM6 376 aa15.8■□□□□ 0.12
USP48-210ENST00000489108 ADGRG4Q8IZF6 3080 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 OR5K3A6NET4 321 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 MFSD11O43934 449 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 LCA5LO95447 670 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 ZBTB11O95625 1053 aaPredicted RBP15.79■□□□□ 0.12
USP48-210ENST00000489108 CCDC172P0C7W6 258 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 PIRTP0C851 137 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 VCLP18206 1134 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 CCNCP24863 283 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 RORAP35398 523 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 CD86P42081 329 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 DCDC1P59894 354 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 GALNT2Q10471 571 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 ABRQ12979 859 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 GALNT3Q14435 633 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 ZRSR2Q15696 482 aaKnown RBP15.79■□□□□ 0.12
USP48-210ENST00000489108 TMTC4Q5T4D3 741 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 PDPK2PQ6A1A2 396 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 TIGD7Q6NT04 549 aaPredicted RBP15.79■□□□□ 0.12
USP48-210ENST00000489108 FAM198BQ6UWH4 519 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 TMC3Q7Z5M5 1100 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 TRAPPC5Q8IUR0 188 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 ST6GALNAC3Q8NDV1 305 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 UBE2Q2Q8WVN8 375 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 PPM1MQ96MI6 270 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 OSGIN2Q9Y236 505 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 ZGRF1Q86YA3 2104 aa15.79■□□□□ 0.12
USP48-210ENST00000489108 SLC4A1P02730 911 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 CD48P09326 243 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 OTX2P32243 289 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 UBXN1Q04323 297 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 TMEM115Q12893 351 aaPredicted RBP15.78■□□□□ 0.12
USP48-210ENST00000489108 LLGL1Q15334 1064 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 IFI16Q16666 785 aaKnown RBP15.78■□□□□ 0.12
USP48-210ENST00000489108 PTCHD3Q3KNS1 767 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 CT47A1Q5JQC4 288 aaPredicted RBP15.78■□□□□ 0.12
USP48-210ENST00000489108 CCDC122Q5T0U0 273 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 FAM182AQ5T1J6 154 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 IGFL3Q6UXB1 125 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 CUZD1Q86UP6 607 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 KCNMB4Q86W47 210 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 SYTL1Q8IYJ3 562 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 TEKT4Q8WW24 435 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 TSGA13Q96PP4 275 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 TLR10Q9BXR5 811 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 ADGRE3Q9BY15 652 aa15.78■□□□□ 0.12
USP48-210ENST00000489108 ZNF552Q9H707 407 aaPredicted RBP15.78■□□□□ 0.12
USP48-210ENST00000489108 ZBTB20Q9HC78 741 aaPredicted RBP15.78■□□□□ 0.12
USP48-210ENST00000489108 RAD18Q9NS91 495 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms