RNA–Protein interactions for RNA: ENST00000488994.5

PNCK-231, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,437 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-231	ENST00000488994	GTF2H3	Q13889	308 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	CSHL1	Q14406	222 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	PDK4	Q16654	411 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	WSCD2	Q2TBF2	565 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	PAQR3	Q6TCH7	311 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	OTOA	Q7RTW8	1153 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	PIM3	Q86V86	326 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	DENND6B	Q8NEG7	585 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	RAB3IL1	Q8TBN0	382 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	NXNL1	Q96CM4	212 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	SCYL1	Q96KG9	808 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	DERL2	Q9GZP9	239 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	MRPL46	Q9H2W6	279 aa	Known RBP	18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	MLXIPL	Q9NP71	852 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	IGSF5	Q9NSI5	407 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	CNOT6	Q9ULM6	557 aa	Known RBP	18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	PLXNA2	O75051	1894 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	GPR89A	B7ZAQ6	455 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	TRIM16	O95361	564 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	PAK4	O96013	591 aa	Predicted RBP	18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	GPR89B	P0CG08	455 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	NEFH	P12036	1026 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	CPA3	P15088	417 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	CNR2	P34972	360 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	NUDT1	P36639	197 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	PRKAA2	P54646	552 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	ANO7	Q6IWH7	933 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	RGS9BP	Q6ZS82	235 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	FAM124A	Q86V42	546 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	RHEBL1	Q8TAI7	183 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	CD200R1	Q8TD46	325 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	GPR78	Q96P69	363 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	TFB2M	Q9H5Q4	396 aa	Known RBP	18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	EMCN	Q9ULC0	261 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	PRSS21	Q9Y6M0	314 aa		18.21	■□□□□ 0.51
PNCK-231	ENST00000488994	CCDC163	A0A0D9SF12	145 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	INPP4B	O15327	924 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	CDK14	O94921	469 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	SEMA4F	O95754	770 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	BPGM	P07738	259 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	ENO3	P13929	434 aa	Predicted RBP	18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	TAC1	P20366	129 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	TRIM23	P36406	574 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	PPARD	Q03181	441 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	ASPH	Q12797	758 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	TTC19	Q6DKK2	380 aa	Predicted RBP	18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	C16orf46	Q6P387	395 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	TMEM207	Q6UWW9	146 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	NUDCD3	Q8IVD9	361 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	FSTL5	Q8N475	847 aa	Predicted RBP	18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	ZBTB2	Q8N680	514 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	SIDT2	Q8NBJ9	832 aa	Known RBP	18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	TP53I13	Q8NBR0	393 aa	Predicted RBP	18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	LRRC8C	Q8TDW0	803 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	ANKRD49	Q8WVL7	239 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	CCDC126	Q96EE4	140 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	COX14	Q96I36	57 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	TEX101	Q9BY14	249 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	SARS2	Q9NP81	518 aa	Known RBP	18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	PHPT1	Q9NRX4	125 aa	Predicted RBP	18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	COPG2	Q9UBF2	871 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	EBF1	Q9UH73	591 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	GPR34	Q9UPC5	381 aa		18.2	■□□□□ 0.5
PNCK-231	ENST00000488994	IQCF5	A8MTL0	148 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994		K7ESM1	405 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	DNAJC6	O75061	913 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	TOP3B	O95985	862 aa	Known RBP	18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	PCCB	P05166	539 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	MYL2	P10916	166 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	CD1D	P15813	335 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	ACSL1	P33121	698 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	CCR5	P51681	352 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	BCL7A	Q4VC05	210 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	PLEKHS1	Q5SXH7	462 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	ATG16L1	Q676U5	607 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	STAG3L4	Q8TBR4	150 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	FAM136A	Q96C01	138 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	SGF29	Q96ES7	293 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	WDR26	Q9H7D7	661 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	ZNF358	Q9NW07	568 aa		18.19	■□□□□ 0.5
PNCK-231	ENST00000488994	KLHL33	A6NCF5	533 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	GMNC	A6NCL1	334 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	TOR1B	O14657	336 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	KLF11	O14901	512 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	H2AFY	O75367	372 aa	Known RBP	18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	HOXC4	P09017	264 aa	Predicted RBP	18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	TFEB	P19484	476 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	CD6	P30203	668 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	PRLHR	P49683	370 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	CDK3	Q00526	305 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	PLOD1	Q02809	727 aa	Predicted RBP	18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	GABPB1	Q06547	395 aa	Predicted RBP	18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	DMWD	Q09019	674 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	DLG1	Q12959	904 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	INPP5A	Q14642	412 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	IRF4	Q15306	451 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	ZYG11A	Q6WRX3	759 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	DET1	Q7L5Y6	550 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	ADGRG6	Q86SQ4	1221 aa		18.18	■□□□□ 0.5
PNCK-231	ENST00000488994	ISCA2	Q86U28	154 aa		18.18	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms