RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 FGFBP1Q14512 234 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 P2RY6Q15077 328 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 HLA-BQ31612 363 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 HIGD2BQ4VC39 106 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 WLSQ5T9L3 541 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 CYP4A22Q5TCH4 519 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 SEL1L3Q68CR1 1132 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 CCSAPQ6IQ19 270 aaPredicted RBP2.21□□□□□ -2.06
CCDC93-209ENST00000488908 TICAM1Q8IUC6 712 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 GPALPP1Q8IXQ4 340 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 C1orf52Q8N6N3 182 aaKnown RBP2.21□□□□□ -2.06
CCDC93-209ENST00000488908 ZNF383Q8NA42 475 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 OR1J2Q8NGS2 313 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 OR2T11Q8NH01 316 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 ZFAND2BQ8WV99 257 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 SMPDL3BQ92485 455 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 RRNAD1Q96FB5 475 aaKnown RBP2.21□□□□□ -2.06
CCDC93-209ENST00000488908 LINC00167Q96N53 147 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 USP28Q96RU2 1077 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 SEMA3CQ99985 751 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 LBHD1Q9BQE6 289 aaPredicted RBP2.21□□□□□ -2.06
CCDC93-209ENST00000488908 WWTR1Q9GZV5 400 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 SLC28A3Q9HAS3 691 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 EXO1Q9UQ84 846 aaKnown RBP2.21□□□□□ -2.06
CCDC93-209ENST00000488908 MYH15Q9Y2K3 1946 aa2.21□□□□□ -2.06
CCDC93-209ENST00000488908 IGLV9-49A0A0B4J1Y8 123 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 LRRC53A6NM62 1247 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 OR6C76A6NM76 312 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 PRC1O43663 620 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 KHDRBS3O75525 346 aaKnown RBP2.2□□□□□ -2.06
CCDC93-209ENST00000488908 CLDN1O95832 211 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 ZSCAN5DPP0CG00 497 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 MAGEA11P43364 429 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 GPR17Q13304 367 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 NFATC2Q13469 925 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 DCTN2Q13561 401 aaKnown RBP2.2□□□□□ -2.06
CCDC93-209ENST00000488908 MAP3K21Q5TCX8 1036 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 ATG16L1Q676U5 607 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 CCDC174Q6PII3 467 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 LRRC8DQ7L1W4 858 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 EMC1Q8N766 993 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 SEMA4DQ92854 862 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 RFT1Q96AA3 541 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 FUCA2Q9BTY2 467 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 SLC6A13Q9NSD5 602 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 MPP6Q9NZW5 540 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 UBA2Q9UBT2 640 aaPredicted RBP2.2□□□□□ -2.06
CCDC93-209ENST00000488908 MUTYHQ9UIF7 546 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 SLC7A7Q9UM01 511 aa2.2□□□□□ -2.06
CCDC93-209ENST00000488908 C22orf31O95567 290 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 ZBTB25P24278 435 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 PSMC2P35998 433 aaKnown RBP2.19□□□□□ -2.06
CCDC93-209ENST00000488908 NKX2-1P43699 371 aaPredicted RBP2.19□□□□□ -2.06
CCDC93-209ENST00000488908 THOP1P52888 689 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 CDH11P55287 796 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 GSCP56915 257 aaPredicted RBP2.19□□□□□ -2.06
CCDC93-209ENST00000488908 GSDMDP57764 484 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 CDC16Q13042 620 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 CAPRIN1Q14444 709 aaKnown RBP2.19□□□□□ -2.06
CCDC93-209ENST00000488908 E2F5Q15329 346 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 TAF5Q15542 800 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 ALG11Q2TAA5 492 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 C15orf32Q32M92 178 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 MARCH9Q86YJ5 346 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 HACE1Q8IYU2 909 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 MYCT1Q8N699 235 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 C17orf47Q8NEP4 570 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 PUS3Q9BZE2 481 aaKnown RBP2.19□□□□□ -2.06
CCDC93-209ENST00000488908 ASAH2Q9NR71 780 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 INTS9Q9NV88 658 aaKnown RBP2.19□□□□□ -2.06
CCDC93-209ENST00000488908 SLC25A10Q9UBX3 287 aaPredicted RBP2.19□□□□□ -2.06
CCDC93-209ENST00000488908 HSF4Q9ULV5 492 aa2.19□□□□□ -2.06
CCDC93-209ENST00000488908 COL16A1Q07092 1604 aaPredicted RBP2.18□□□□□ -2.06
CCDC93-209ENST00000488908 TEX13DA0A0J9YY54 714 aaPredicted RBP2.18□□□□□ -2.06
CCDC93-209ENST00000488908 DNM1LO00429 736 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 PHOX2AO14813 284 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 IDH3BO43837 385 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 ZNF182P17025 639 aaPredicted RBP2.18□□□□□ -2.06
CCDC93-209ENST00000488908 CKMT2P17540 419 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 CHKAP35790 457 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 PAX8Q06710 450 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 EIF4EBP2Q13542 120 aaPredicted RBP2.18□□□□□ -2.06
CCDC93-209ENST00000488908 FASTKD3Q14CZ7 662 aaKnown RBP2.18□□□□□ -2.06
CCDC93-209ENST00000488908 NSUN5P2Q63ZY6 315 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 FIP1L1Q6UN15 594 aaKnown RBP2.18□□□□□ -2.06
CCDC93-209ENST00000488908 PP632Q6XCG6 107 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 BBS12Q6ZW61 710 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 DNAJC22Q8N4W6 341 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 DCLK2Q8N568 766 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 GCSAMQ8N6F7 178 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 SLC38A9Q8NBW4 561 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 OR14L1PQ8NHC6 308 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 ZCCHC10Q8TBK6 192 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 HPSE2Q8WWQ2 592 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 GAL3ST4Q96RP7 486 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 DGCR6LQ9BY27 220 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 PITPNM3Q9BZ71 974 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 MAGIXQ9H6Y5 334 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 OLFML3Q9NRN5 406 aa2.18□□□□□ -2.06
CCDC93-209ENST00000488908 RIPOR2Q9Y4F9 1068 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms