RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 HECTD2Q5U5R9 776 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 NAPRTQ6XQN6 538 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 PIM3Q86V86 326 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 ZNF547Q8IVP9 402 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 DCLK2Q8N568 766 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 ACVR1CQ8NER5 493 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 ELMO1Q92556 727 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 ZNF514Q96K75 400 aaPredicted RBP12.13□□□□□ -0.47
TRAIP-209ENST00000488860 BIRC8Q96P09 236 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 PANX3Q96QZ0 392 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 CCM2Q9BSQ5 444 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 NUSAP1Q9BXS6 441 aaKnown RBP12.13□□□□□ -0.47
TRAIP-209ENST00000488860 SLC13A1Q9BZW2 595 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 KCNH6Q9H252 994 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 TCEAL2Q9H3H9 227 aaPredicted RBP12.13□□□□□ -0.47
TRAIP-209ENST00000488860 OSGEPL1Q9H4B0 414 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 NCDNQ9UBB6 729 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 SLC24A2Q9UI40 661 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 SLC39A10Q9ULF5 831 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 KCNK6Q9Y257 313 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 DNAJC16Q9Y2G8 782 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 MTO1Q9Y2Z2 717 aaKnown RBP12.13□□□□□ -0.47
TRAIP-209ENST00000488860 COMMD10Q9Y6G5 202 aa12.13□□□□□ -0.47
TRAIP-209ENST00000488860 RASGRF2O14827 1237 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 CHUKO15111 745 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 SDC3O75056 442 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 KRT38O76015 456 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 FUCA1P04066 466 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 CTSEP14091 401 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 CTSKP43235 329 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 BLKP51451 505 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 HK3P52790 923 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 PGGT1BP53609 377 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 ADARP55265 1226 aaKnown RBP12.12□□□□□ -0.47
TRAIP-209ENST00000488860 CDKN2DP55273 166 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 IL9RQ01113 521 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 BNC1Q01954 994 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 ZNF844Q08AG5 666 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 PDAP1Q13442 181 aaKnown RBP12.12□□□□□ -0.47
TRAIP-209ENST00000488860 ZNF460Q14592 562 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 USP10Q14694 798 aaKnown RBP12.12□□□□□ -0.47
TRAIP-209ENST00000488860 CEP85LQ5SZL2 805 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 TCEAL6Q6IPX3 200 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 HDXQ7Z353 690 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 OXR1Q8N573 874 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 SIDT2Q8NBJ9 832 aaKnown RBP12.12□□□□□ -0.47
TRAIP-209ENST00000488860 TCEAL3Q969E4 200 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 GPR21Q99679 349 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 GPR22Q99680 433 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 OLFM1Q99784 485 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 DHRS4Q9BTZ2 278 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 GTPBP2Q9BX10 602 aaKnown RBP12.12□□□□□ -0.47
TRAIP-209ENST00000488860 TMEM168Q9H0V1 697 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 CENPHQ9H3R5 247 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 CAB39LQ9H9S4 337 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 PPCSQ9HAB8 311 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 FETUBQ9UGM5 382 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 KLF15Q9UIH9 416 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 TRMT6Q9UJA5 497 aaKnown RBP12.12□□□□□ -0.47
TRAIP-209ENST00000488860 ZNF180Q9UJW8 692 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 SLC6A14Q9UN76 642 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 GPR34Q9UPC5 381 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 PLEKHM1Q9Y4G2 1056 aa12.12□□□□□ -0.47
TRAIP-209ENST00000488860 ARHGEF17Q96PE2 2063 aaPredicted RBP12.12□□□□□ -0.47
TRAIP-209ENST00000488860 ANKRD12Q6UB98 2062 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 IQANK1A0A1B0GTG1 560 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 TRIM49D1C9J1S8 452 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 KHNYNO15037 678 aaKnown RBP12.11□□□□□ -0.47
TRAIP-209ENST00000488860 CDH16O75309 829 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 POP7O75817 140 aaKnown RBP12.11□□□□□ -0.47
TRAIP-209ENST00000488860 KRT37O76014 449 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 CSF2P04141 144 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 RETP07949 1114 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 CELA2BP08218 269 aaPredicted RBP12.11□□□□□ -0.47
TRAIP-209ENST00000488860 SYPP08247 313 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 NME1P15531 152 aaKnown RBP12.11□□□□□ -0.47
TRAIP-209ENST00000488860 VCLP18206 1134 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 FDXRP22570 491 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 CNTFP26441 200 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 AK4P27144 223 aaPredicted RBP12.11□□□□□ -0.47
TRAIP-209ENST00000488860 NBL1P41271 181 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 SERPINB8P50452 374 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 C1orf61Q13536 156 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 NFE2L1Q14494 772 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 SEPT7Q16181 437 aaKnown RBP12.11□□□□□ -0.47
TRAIP-209ENST00000488860 PRRT3Q5FWE3 981 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 LGSNQ5TDP6 509 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 SLC23A3Q6PIS1 610 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 SLC30A9Q6PML9 568 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 ADGRD1Q6QNK2 874 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 LRIG3Q6UXM1 1119 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 RAPH1Q70E73 1250 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 OTOAQ7RTW8 1153 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 CMC1Q7Z7K0 106 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 AMZ2Q86W34 360 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 SPNS2Q8IVW8 549 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 SUMF1Q8NBK3 374 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 OR2I1PQ8NGU4 316 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 HM13Q8TCT9 377 aa12.11□□□□□ -0.47
TRAIP-209ENST00000488860 LMX1AQ8TE12 382 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms