RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 RBMS1P29558 406 aaKnown RBP12.66□□□□□ -0.38
PHF1-210ENST00000488767 TTPAP49638 278 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 PRLHRP49683 370 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 EPHA4P54764 986 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 OR1D5P58170 312 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 DR1Q01658 176 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 KRT33BQ14525 404 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 SYTL3Q4VX76 610 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.66□□□□□ -0.38
PHF1-210ENST00000488767 PHF19Q5T6S3 580 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 ABRAXAS1Q6UWZ7 409 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 C11orf96Q7Z7L8 435 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 SDCCAG8Q86SQ7 713 aaPredicted RBP12.66□□□□□ -0.38
PHF1-210ENST00000488767 MARCH9Q86YJ5 346 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 KLHL7Q8IXQ5 586 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 MCUQ8NE86 351 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 OR13J1Q8NGT2 312 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 WDR36Q8NI36 951 aaKnown RBP12.66□□□□□ -0.38
PHF1-210ENST00000488767 HM13Q8TCT9 377 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 SGSM3Q96HU1 749 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 LINC00615Q96LM1 132 aaPredicted RBP12.66□□□□□ -0.38
PHF1-210ENST00000488767 CCM2Q9BSQ5 444 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 MRM3Q9HC36 420 aaKnown RBP12.66□□□□□ -0.38
PHF1-210ENST00000488767 CATSPERZQ9NTU4 200 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 FAM8A1Q9UBU6 413 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 HEBP2Q9Y5Z4 205 aa12.66□□□□□ -0.38
PHF1-210ENST00000488767 IGLV3-16A0A075B6K0 115 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 CCDC187A0A096LP49 1063 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 C17orf113A0A1B0GUU1 675 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 A0A1W2PQM1 296 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 SDR42E2A6NKP2 422 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 IFRD1O00458 451 aaPredicted RBP12.65□□□□□ -0.38
PHF1-210ENST00000488767 FANCGO15287 622 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 PPM1DO15297 605 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 EML2O95834 649 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 CCKBRP32239 447 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 MAPK9P45984 424 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 ARSDP51689 593 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 GABREP78334 506 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 CRADDP78560 199 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 B4GALNT1Q00973 533 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 ACVR1Q04771 509 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 CYP4F3Q08477 520 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 CAMK2BQ13554 666 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 PTK6Q13882 451 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 NFE2L1Q14494 772 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 RTP5Q14D33 572 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 DBN1Q16643 649 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 ST3GAL2Q16842 350 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 C3orf38Q5JPI3 329 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 METRNLQ641Q3 311 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 MRNIPQ6NTE8 343 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 PACS1Q6VY07 963 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 PIANPQ8IYJ0 282 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 CFAP206Q8IYR0 622 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 MPP5Q8N3R9 675 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 KDF1Q8NAX2 398 aaPredicted RBP12.65□□□□□ -0.38
PHF1-210ENST00000488767 GABPB2Q8TAK5 448 aaPredicted RBP12.65□□□□□ -0.38
PHF1-210ENST00000488767 CPT1BQ92523 772 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 ATXN7L3BQ96GX2 97 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 LIN37Q96GY3 246 aaPredicted RBP12.65□□□□□ -0.38
PHF1-210ENST00000488767 CMKLR1Q99788 373 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 KIFC1Q9BW19 673 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 POLR1BQ9H9Y6 1135 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 UCK1Q9HA47 277 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 SYBUQ9NX95 663 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 DKK4Q9UBT3 224 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 SLC2A6Q9UGQ3 507 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 SOX13Q9UN79 622 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 PCDHB1Q9Y5F3 818 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 ENTPD2Q9Y5L3 495 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 COLEC10Q9Y6Z7 277 aa12.65□□□□□ -0.38
PHF1-210ENST00000488767 ZNF106Q9H2Y7 1883 aaKnown RBP12.65□□□□□ -0.38
PHF1-210ENST00000488767 TPRP12270 2363 aaKnown RBP12.64□□□□□ -0.39
PHF1-210ENST00000488767 PTPRBP23467 1997 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 IGHV1OR21-1A0A087WYE8 117 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 TCRBV7S3A2A0A539 114 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 OR51F1A6NGY5 319 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 LILRA5A6NI73 299 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 OR52A4PA6NMU1 304 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 GOLGA8MH3BSY2 632 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 SMAPO00193 183 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 CD3EAPO15446 510 aaKnown RBP12.64□□□□□ -0.39
PHF1-210ENST00000488767 B4GAT1O43505 415 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 MPOP05164 745 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 JMJD7P0C870 316 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 AMD1P17707 334 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 NDUFS1P28331 727 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 FOXN2P32314 431 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 MLLT3P42568 568 aaPredicted RBP12.64□□□□□ -0.39
PHF1-210ENST00000488767 LSSP48449 732 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 CDKN1CP49918 316 aaPredicted RBP12.64□□□□□ -0.39
PHF1-210ENST00000488767 UBE2IP63279 158 aaKnown RBP12.64□□□□□ -0.39
PHF1-210ENST00000488767 PLOD1Q02809 727 aaPredicted RBP12.64□□□□□ -0.39
PHF1-210ENST00000488767 TRA2AQ13595 282 aaKnown RBP eCLIP12.64□□□□□ -0.39
PHF1-210ENST00000488767 DHX34Q14147 1143 aaKnown RBP12.64□□□□□ -0.39
PHF1-210ENST00000488767 PLCL1Q15111 1095 aa12.64□□□□□ -0.39
PHF1-210ENST00000488767 DNAJC21Q5F1R6 531 aaKnown RBP12.64□□□□□ -0.39
PHF1-210ENST00000488767 RNF187Q5TA31 235 aaPredicted RBP12.64□□□□□ -0.39
PHF1-210ENST00000488767 KLHL35Q6PF15 583 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms