RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 SLC47A1Q96FL8 570 aa3.53□□□□□ -1.84
CCDC66-221ENST00000487739 EGLN2Q96KS0 407 aa3.53□□□□□ -1.84
CCDC66-221ENST00000487739 SEPT5Q99719 369 aaPredicted RBP3.53□□□□□ -1.84
CCDC66-221ENST00000487739 SYT11Q9BT88 431 aa3.53□□□□□ -1.84
CCDC66-221ENST00000487739 EPB41L5Q9HCM4 733 aa3.53□□□□□ -1.84
CCDC66-221ENST00000487739 ZNF71Q9NQZ8 489 aaPredicted RBP3.53□□□□□ -1.84
CCDC66-221ENST00000487739 OBSCNQ5VST9 7968 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 IGKV6D-41A0A0C4DH26 115 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 PRR32B1ATL7 298 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 PLK4O00444 970 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 TPOP07202 933 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 EPHA2P29317 976 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 MAPK9P45984 424 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 CSRP3P50461 194 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 CD81P60033 236 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 TMEM115Q12893 351 aaPredicted RBP3.52□□□□□ -1.85
CCDC66-221ENST00000487739 LRMPQ12912 555 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 MFAP5Q13361 173 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 ARHGEF16Q5VV41 709 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 PWWP2BQ6NUJ5 590 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 ZNF613Q6PF04 617 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 TRIM65Q6PJ69 517 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 PLD3Q8IV08 490 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 RNF168Q8IYW5 571 aaPredicted RBP3.52□□□□□ -1.85
CCDC66-221ENST00000487739 SCML4Q8N228 414 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 ZNF611Q8N823 705 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 ZNF614Q8N883 585 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 TMEM143Q96AN5 459 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 GIMAP5Q96F15 307 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 IWS1Q96ST2 819 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 RTP3Q9BQQ7 232 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 PAIP1Q9H074 479 aaKnown RBP3.52□□□□□ -1.85
CCDC66-221ENST00000487739 WASH6PQ9NQA3 447 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 RCC2Q9P258 522 aaKnown RBP3.52□□□□□ -1.85
CCDC66-221ENST00000487739 RABGAP1Q9Y3P9 1069 aa3.52□□□□□ -1.85
CCDC66-221ENST00000487739 E9PQ18 207 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 ZBTB43O43298 467 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 NDUFS3O75489 264 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 TRMUO75648 421 aaKnown RBP3.51□□□□□ -1.85
CCDC66-221ENST00000487739 HRH2P25021 359 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 ICAM3P32942 547 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 KRT9P35527 623 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 SLC8A3P57103 927 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 TFAP4Q01664 338 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 MVPQ14764 893 aaKnown RBP3.51□□□□□ -1.85
CCDC66-221ENST00000487739 GPALPP1Q8IXQ4 340 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 NGEFQ8N5V2 710 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 METTL6Q8TCB7 284 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 GRHL3Q8TE85 626 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 C18orf12Q96KH6 178 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 PLCXD1Q9NUJ7 323 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 B3GALT5Q9Y2C3 310 aa3.51□□□□□ -1.85
CCDC66-221ENST00000487739 R3HDM2Q9Y2K5 976 aaKnown RBP3.51□□□□□ -1.85
CCDC66-221ENST00000487739 COL5A2P05997 1499 aaPredicted RBP3.51□□□□□ -1.85
CCDC66-221ENST00000487739 A0A087WW49 117 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 TEX13DA0A0J9YY54 714 aaPredicted RBP3.5□□□□□ -1.85
CCDC66-221ENST00000487739 A0A1W2PQF6 199 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 NPIPB15A6NHN6 443 aaPredicted RBP3.5□□□□□ -1.85
CCDC66-221ENST00000487739 H3BQ06 376 aaPredicted RBP3.5□□□□□ -1.85
CCDC66-221ENST00000487739 HCRTR2O43614 444 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 PLPP2O43688 288 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 ZFAND5O76080 213 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 UBL4AP11441 157 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 NFKBIAP25963 317 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 SLC6A12P48065 614 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 CEBPZQ03701 1054 aaKnown RBP3.5□□□□□ -1.85
CCDC66-221ENST00000487739 GOLGA8DPQ0D2H9 430 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 NAB2Q15742 525 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 LRIF1Q5T3J3 769 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 ESX1Q8N693 406 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 BMPERQ8N8U9 685 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 TMEM116Q8NCL8 245 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 OR8K5Q8NH50 307 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 SEMA4DQ92854 862 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 RPS10P5Q9NQ39 176 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 MTMR10Q9NXD2 777 aa3.5□□□□□ -1.85
CCDC66-221ENST00000487739 LRRFIP2Q9Y608 721 aaKnown RBP3.5□□□□□ -1.85
CCDC66-221ENST00000487739 IGLV7-46A0A075B6I9 117 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 IGHV4-4A0A075B6R2 117 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 OR2M5A3KFT3 312 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 OR6C76A6NM76 312 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 SMAD9O15198 467 aaKnown RBP3.49□□□□□ -1.85
CCDC66-221ENST00000487739 TGFB1I1O43294 461 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 ZNF217O75362 1048 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 NGFP01138 241 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 EDN1P05305 212 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 CKMT2P17540 419 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 CEACAM8P31997 349 aaPredicted RBP3.49□□□□□ -1.85
CCDC66-221ENST00000487739 PPM1FP49593 454 aaPredicted RBP3.49□□□□□ -1.85
CCDC66-221ENST00000487739 THOP1P52888 689 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 UGP2Q16851 508 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 HACE1Q8IYU2 909 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 ZNRF4Q8WWF5 429 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 AGAP3Q96P47 875 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 GFI1Q99684 422 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 AGXT2Q9BYV1 514 aa3.49□□□□□ -1.85
CCDC66-221ENST00000487739 SEMA6AQ9H2E6 1030 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms