RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 SGTAO43765 313 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 HPCAP84074 193 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 SEMG2Q02383 582 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 RBM44Q6ZP01 1051 aaKnown RBP11.66□□□□□ -0.54
TRA2B-214ENST00000487615 PGBD3Q8N328 593 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 CBR4Q8N4T8 237 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 CXorf40AQ8TE69 158 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 CENPNQ96H22 339 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-214ENST00000487615 CDK15Q96Q40 435 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 APOL4Q9BPW4 351 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 SLC39A3Q9BRY0 314 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 C11orf84Q9BUA3 381 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-214ENST00000487615 RIBC2Q9H4K1 309 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 FBRSL1Q9HCM7 1045 aaKnown RBP11.66□□□□□ -0.54
TRA2B-214ENST00000487615 ADGRE2Q9UHX3 823 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 SIPA1L1O43166 1804 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 ABHD14A-ACY1A0A1B0GW23 586 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 FAM234BA2RU67 622 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 K7EPI3 171 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 ADAMTS4O75173 837 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 ADH1CP00326 375 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 ATP6V1E1P36543 226 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 KIR3DL1P43629 444 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 RXRGP48443 463 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 SLC5A9Q2M3M2 681 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 TRPV1Q8NER1 839 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 GPR156Q8NFN8 814 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 RHEBL1Q8TAI7 183 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 SH3RF2Q8TEC5 729 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 TOP1MTQ969P6 601 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 UTP4Q969X6 686 aaKnown RBP11.66□□□□□ -0.54
TRA2B-214ENST00000487615 KLHL32Q96NJ5 620 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 SORT1Q99523 831 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 HEPHQ9BQS7 1158 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 SUV39H2Q9H5I1 410 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 CACNA2D2Q9NY47 1150 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 CD84Q9UIB8 345 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 FADS3Q9Y5Q0 445 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 SYNDIG1LA6NDD5 238 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 WASH4PA8MWX3 477 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 PTGES3LE9PB15 166 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 C1QTNF3-AMACRE9PGA6 284 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 GABBR2O75899 941 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 CDK14O94921 469 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 CD1DP15813 335 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 RRM2P31350 389 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 SEMA3BQ13214 749 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 KDELC1Q6UW63 502 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 MAPK15Q8TD08 544 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 DGCR14Q96DF8 476 aaKnown RBP11.66□□□□□ -0.54
TRA2B-214ENST00000487615 DACH2Q96NX9 599 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 VPS51Q9UID3 782 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 AQP12BA6NM10 295 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 STX16O14662 325 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 ATG13O75143 517 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 BCAS2O75934 225 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-214ENST00000487615 STC2O76061 302 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 PTPN2P17706 415 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 CST5P28325 142 aaPredicted RBP11.66□□□□□ -0.54
TRA2B-214ENST00000487615 ROR2Q01974 943 aaKnown RBP11.66□□□□□ -0.54
TRA2B-214ENST00000487615 SGCGQ13326 291 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 AQP12AQ8IXF9 295 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 CLDN19Q8N6F1 224 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 OR8D1Q8WZ84 308 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 LRRC58Q96CX6 371 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 NME7Q9Y5B8 376 aa11.66□□□□□ -0.54
TRA2B-214ENST00000487615 LTBP1Q14766 1721 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 ANKDD1BA6NHY2 528 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 OR2AG2A6NM03 316 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 C8GP07360 202 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 CDKN2DP55273 166 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 TP53BP2Q13625 1128 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 ZNF697Q5TEC3 545 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 KCTD11Q693B1 232 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 ZCCHC8Q6NZY4 707 aaKnown RBP11.65□□□□□ -0.54
TRA2B-214ENST00000487615 SFRP1Q8N474 314 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 GLB1L3Q8NCI6 653 aaPredicted RBP11.65□□□□□ -0.54
TRA2B-214ENST00000487615 AP2M1Q96CW1 435 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 TDRD1Q9BXT4 1180 aaKnown RBP11.65□□□□□ -0.54
TRA2B-214ENST00000487615 MTRRQ9UBK8 725 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 TPRKBQ9Y3C4 175 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 CLDN7O95471 211 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 RPL34P49207 117 aaKnown RBP11.65□□□□□ -0.54
TRA2B-214ENST00000487615 RPL26P61254 145 aaKnown RBP11.65□□□□□ -0.54
TRA2B-214ENST00000487615 ADAM17P78536 824 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 CHRNA6Q15825 494 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 PPP1R3AQ16821 1122 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 INTS11Q5TA45 600 aaKnown RBP11.65□□□□□ -0.54
TRA2B-214ENST00000487615 ZNF783Q6ZMS7 281 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 KCNA7Q96RP8 456 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 TCF25Q9BQ70 676 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 RAD21L1Q9H4I0 556 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 COQ10BQ9H8M1 238 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 C1orf109Q9NX04 203 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 POLR2AP24928 1970 aaKnown RBP11.65□□□□□ -0.54
TRA2B-214ENST00000487615 ELOVL7A1L3X0 281 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 AURKAO14965 403 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 MT-ND1P03886 318 aa11.65□□□□□ -0.54
TRA2B-214ENST00000487615 HNRNPCP07910 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRA2B-214ENST00000487615 ETS2P15036 469 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms