RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 LLGL1Q15334 1064 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 PLA1AQ53H76 456 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 LACTB2Q53H82 288 aaPredicted RBP4.46□□□□□ -1.7
CNN3-206ENST00000487539 RNF220Q5VTB9 566 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 MOXD1Q6UVY6 613 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 SPNS3Q6ZMD2 512 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 RBM44Q6ZP01 1051 aaKnown RBP4.46□□□□□ -1.7
CNN3-206ENST00000487539 MAVSQ7Z434 540 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 METTL23Q86XA0 190 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 CATSPER3Q86XQ3 398 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 DAW1Q8N136 415 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 PDCL2Q8N4E4 241 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 LRTOMTQ8WZ04 291 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 PIWIL1Q96J94 861 aaKnown RBP4.46□□□□□ -1.7
CNN3-206ENST00000487539 PPP1R13BQ96KQ4 1090 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 TTLL2Q9BWV7 592 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 CXorf36Q9H7Y0 433 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 ERVMER34-1Q9H9K5 563 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 SMURF2Q9HAU4 748 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 SGK2Q9HBY8 427 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 EPB41L5Q9HCM4 733 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 PRSS16Q9NQE7 514 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 GJB4Q9NTQ9 266 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 ELOVL2Q9NXB9 296 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 KLHL42Q9P2K6 505 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 TACC2O95359 2948 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 UNC13CQ8NB66 2214 aa4.46□□□□□ -1.7
CNN3-206ENST00000487539 COL6A5A8TX70 2615 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 ZNF106Q9H2Y7 1883 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 MBD3L4A6NDZ8 208 aaPredicted RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 MBD3L3A6NE82 208 aaPredicted RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 LRRC3CA6NJW4 275 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 QSOX1O00391 747 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 TPP1O14773 563 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 MDM4O15151 490 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 SLC16A4O15374 487 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 FAM189A1O60320 539 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 CCNT1O60563 726 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 PIAS2O75928 621 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 GP1BAP07359 652 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 FAM163BP0C2L3 166 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 CPA1P15085 419 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 HOXB6P17509 224 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 OAS2P29728 719 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 MAT2AP31153 395 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 EFNA5P52803 228 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 METAP1P53582 386 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 PRKAG1P54619 331 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 SUMO3P55854 103 aaPredicted RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 ZNF177Q13360 481 aaPredicted RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 CNGA2Q16280 664 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 INSCQ1MX18 579 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 DEFB109BQ30KR1 87 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 NADK2Q4G0N4 442 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 AARS2Q5JTZ9 985 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 SUMO4Q6EEV6 95 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 FAM171BQ6P995 826 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 SYNE3Q6ZMZ3 975 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 RAB11FIP2Q7L804 512 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 SLC29A4Q7RTT9 530 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 TIPARPQ7Z3E1 657 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 SPATA2LQ8IUW3 424 aaPredicted RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 WDR75Q8IWA0 830 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 BLIDQ8IZY5 108 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 SLC34A3Q8N130 599 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 TEX19Q8NA77 164 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 MCPH1Q8NEM0 835 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 RP9Q8TA86 221 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 BICD2Q8TD16 824 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 GANCQ8TET4 914 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 MYLPFQ96A32 169 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 SPSB4Q96A44 273 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 NMD3Q96D46 503 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 OTUB2Q96DC9 234 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 APIPQ96GX9 242 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 SPATA17Q96L03 361 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 CCDC43Q96MW1 224 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 XPO6Q96QU8 1125 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 PPP1R9BQ96SB3 815 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 SLC26A6Q9BXS9 759 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 CIPCQ9C0C6 399 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 SYNDIG1Q9H7V2 258 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 PRDM8Q9NQV8 689 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 SACM1LQ9NTJ5 587 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 FBXL12Q9NXK8 326 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 DDX43Q9NXZ2 648 aaKnown RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 LUZP4Q9P127 313 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 NAP1L2Q9ULW6 460 aaPredicted RBP4.45□□□□□ -1.7
CNN3-206ENST00000487539 PADI4Q9UM07 663 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 KCNJ14Q9UNX9 436 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 ENTPD4Q9Y227 616 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 NME7Q9Y5B8 376 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 DCHS2Q6V1P9 2916 aa4.45□□□□□ -1.7
CNN3-206ENST00000487539 A6NNZ2 444 aa4.44□□□□□ -1.7
CNN3-206ENST00000487539 KPNA7A9QM74 516 aa4.44□□□□□ -1.7
CNN3-206ENST00000487539 F8VP50 259 aa4.44□□□□□ -1.7
CNN3-206ENST00000487539 MID1O15344 667 aa4.44□□□□□ -1.7
CNN3-206ENST00000487539 NVLO15381 856 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms