RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 SKIDA1Q1XH10 827 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 LDLRAP1Q5SW96 308 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 IZUMO3Q5VZ72 239 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 OGFOD3Q6PK18 319 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 CCDC81Q6ZN84 652 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 NLRP9Q7RTR0 991 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 PIANPQ8IYJ0 282 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 RASGEF1AQ8N9B8 481 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 PPHLN1Q8NEY8 458 aaKnown RBP12.72□□□□□ -0.37
SSR4-211ENST00000486204 KIFC1Q9BW19 673 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 GSDMCQ9BYG8 508 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 FAM96AQ9H5X1 160 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 POLR1BQ9H9Y6 1135 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 MRM3Q9HC36 420 aaKnown RBP12.72□□□□□ -0.37
SSR4-211ENST00000486204 XAB2Q9HCS7 855 aaKnown RBP12.72□□□□□ -0.37
SSR4-211ENST00000486204 THSD1Q9NS62 852 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 SPATS2LQ9NUQ6 558 aaKnown RBP12.72□□□□□ -0.37
SSR4-211ENST00000486204 BFARQ9NZS9 450 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 SOX13Q9UN79 622 aa12.72□□□□□ -0.37
SSR4-211ENST00000486204 A6NCN8 305 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 GOLGA8MH3BSY2 632 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 KIF2AO00139 706 aaPredicted RBP12.71□□□□□ -0.37
SSR4-211ENST00000486204 GRID2O43424 1007 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 SUV39H1O43463 412 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 URI1O94763 535 aaPredicted RBP12.71□□□□□ -0.37
SSR4-211ENST00000486204 CDK14O94921 469 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 TUBB4AP04350 444 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 ACP5P13686 325 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 ARNTP27540 789 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 NMBRP28336 390 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 CTSCP53634 463 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 MRPS25P82663 173 aaKnown RBP12.71□□□□□ -0.37
SSR4-211ENST00000486204 CACNG1Q06432 222 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 LAMB3Q13751 1172 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 LRP8Q14114 963 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 GPR33Q49SQ1 333 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 ARMC3Q5W041 872 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 SLC30A9Q6PML9 568 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 CRTC3Q6UUV7 619 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 CHST15Q7LFX5 561 aaPredicted RBP12.71□□□□□ -0.37
SSR4-211ENST00000486204 TAF8Q7Z7C8 310 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 LRRTM4Q86VH4 590 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 HOOK3Q86VS8 718 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 C17orf82Q86X59 251 aaPredicted RBP12.71□□□□□ -0.37
SSR4-211ENST00000486204 ARL10Q8N8L6 244 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 KYQ8NBH2 561 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 GPR156Q8NFN8 814 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 GDAP1Q8TB36 358 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 NAT14Q8WUY8 206 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 HDAC10Q969S8 669 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 SGSM3Q96HU1 749 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 DEPDC7Q96QD5 511 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 TRIM56Q9BRZ2 755 aaKnown RBP12.71□□□□□ -0.37
SSR4-211ENST00000486204 ASCL3Q9NQ33 180 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 TAAR2Q9P1P5 351 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 SLC23A2Q9UGH3 650 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 ZNHIT2Q9UHR6 403 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 CRLS1Q9UJA2 301 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 GPR34Q9UPC5 381 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 DOLKQ9UPQ8 538 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 KCNK6Q9Y257 313 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 MRFAP1Q9Y605 127 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 SLC30A1Q9Y6M5 507 aa12.71□□□□□ -0.37
SSR4-211ENST00000486204 UBR5O95071 2799 aaPredicted RBP12.71□□□□□ -0.38
SSR4-211ENST00000486204 USP9XQ93008 2570 aaPredicted RBP12.71□□□□□ -0.38
SSR4-211ENST00000486204 TEX15Q9BXT5 2789 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 EME2A4GXA9 379 aaPredicted RBP12.7□□□□□ -0.38
SSR4-211ENST00000486204 B4DGG1 531 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 RAD51CO43502 376 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 SEC31AO94979 1220 aaKnown RBP12.7□□□□□ -0.38
SSR4-211ENST00000486204 EML2O95834 649 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 GOT2P00505 430 aaKnown RBP12.7□□□□□ -0.38
SSR4-211ENST00000486204 ACRV1P26436 265 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 ACTR1BP42025 376 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 RPL21P46778 160 aaKnown RBP12.7□□□□□ -0.38
SSR4-211ENST00000486204 CLCNKAP51800 687 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 ACTR1AP61163 376 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 SARNPP82979 210 aaKnown RBP12.7□□□□□ -0.38
SSR4-211ENST00000486204 DAB2P98082 770 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 CKAP4Q07065 602 aaKnown RBP12.7□□□□□ -0.38
SSR4-211ENST00000486204 SEMA3AQ14563 771 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 DBN1Q16643 649 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 PLA2G4EQ3MJ16 856 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 C4orf17Q53FE4 359 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 ZRANB3Q5FWF4 1079 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 CDCP2Q5VXM1 449 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 HIBCHQ6NVY1 386 aaPredicted RBP12.7□□□□□ -0.38
SSR4-211ENST00000486204 GUSBP11Q6P575 273 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 AFTPHQ6ULP2 937 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 XKR5Q6UX68 686 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 SERPINA9Q86WD7 417 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 NAGSQ8N159 534 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 FAM46DQ8NEK8 389 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 ZNF592Q92610 1267 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 ULK4Q96C45 1275 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 MFSD3Q96ES6 412 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 SIGLEC10Q96LC7 697 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 TIMM29Q9BSF4 260 aa12.7□□□□□ -0.38
SSR4-211ENST00000486204 ZCCHC2Q9C0B9 1178 aaKnown RBP12.7□□□□□ -0.38
SSR4-211ENST00000486204 STARD5Q9NSY2 213 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms