RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 TRMT6Q9UJA5 497 aaKnown RBP17.34■□□□□ 0.37
TNXB-205ENST00000486148 FAM32AQ9Y421 112 aaKnown RBP17.34■□□□□ 0.37
TNXB-205ENST00000486148 EI24O14681 340 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 RASAL1O95294 804 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 GJB5O95377 273 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 MLYCDO95822 493 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 CHEK2O96017 543 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 ATF6P18850 670 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 LPOP22079 712 aaPredicted RBP17.33■□□□□ 0.36
TNXB-205ENST00000486148 BCL2A1Q16548 175 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 RTP2Q5QGT7 225 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 NANOGP8Q6NSW7 305 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 TXNDC11Q6PKC3 985 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 GPSM1Q86YR5 675 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 OR56A4Q8NGH8 313 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 NANOGQ9H9S0 305 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 CD274Q9NZQ7 290 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 SUN2Q9UH99 717 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 AGO1Q9UL18 857 aaKnown RBP17.33■□□□□ 0.36
TNXB-205ENST00000486148 RAI2Q9Y5P3 530 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 SLC38A8A6NNN8 435 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 IQCF5A8MTL0 148 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 F11P03951 625 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 PSMA3P25788 255 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 RFC2P35250 354 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 KPNA1P52294 538 aaPredicted RBP17.33■□□□□ 0.36
TNXB-205ENST00000486148 CDH4P55283 916 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 FCGRTP55899 365 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 NUP107P57740 925 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 ERVK-8P63133 956 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 GRIK2Q13002 908 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 ZRANB3Q5FWF4 1079 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 C6orf136Q5SQH8 315 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 GPRIN3Q6ZVF9 776 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 DENND1CQ8IV53 801 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 RPF2Q9H7B2 306 aaKnown RBP17.33■□□□□ 0.36
TNXB-205ENST00000486148 SARS2Q9NP81 518 aaKnown RBP17.33■□□□□ 0.36
TNXB-205ENST00000486148 LEF1Q9UJU2 399 aaPredicted RBP17.33■□□□□ 0.36
TNXB-205ENST00000486148 V9GYQ6 96 aa17.33■□□□□ 0.36
TNXB-205ENST00000486148 NT5C1B-RDH14C9J2C7 533 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 K7EPI3 171 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 CBX4O00257 560 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 OCM2P0CE71 109 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 OCMP0CE72 109 aaPredicted RBP17.32■□□□□ 0.36
TNXB-205ENST00000486148 PRKAR2AP13861 404 aaKnown RBP17.32■□□□□ 0.36
TNXB-205ENST00000486148 HRH2P25021 359 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 ERVPABLB-1P60509 514 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 IL2P60568 153 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 CAP1Q01518 475 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 CD300CQ08708 224 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 C18orf21Q32NC0 220 aaPredicted RBP17.32■□□□□ 0.36
TNXB-205ENST00000486148 SPATS1Q496A3 300 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 Q6ZSR9 355 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 FNDC5Q8NAU1 212 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 PROKR1Q8TCW9 393 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 NUDT8Q8WV74 236 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 CYGBQ8WWM9 190 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 HEPHQ9BQS7 1158 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 TSR3Q9UJK0 312 aaKnown RBP17.32■□□□□ 0.36
TNXB-205ENST00000486148 DNMT3LQ9UJW3 386 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 ARIH1Q9Y4X5 557 aaPredicted RBP17.32■□□□□ 0.36
TNXB-205ENST00000486148 TRIM17Q9Y577 477 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 SYNCRIPO60506 623 aaKnown RBP17.32■□□□□ 0.36
TNXB-205ENST00000486148 ELNP15502 786 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 CST5P28325 142 aaPredicted RBP17.32■□□□□ 0.36
TNXB-205ENST00000486148 HABP4Q5JVS0 413 aaKnown RBP17.32■□□□□ 0.36
TNXB-205ENST00000486148 RGMBQ6NW40 437 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 SLC2A7Q6PXP3 512 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 HBEGFQ99075 208 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 PAIP1Q9H074 479 aaKnown RBP17.32■□□□□ 0.36
TNXB-205ENST00000486148 TBC1D23Q9NUY8 699 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 ITGB1BP2Q9UKP3 347 aa17.32■□□□□ 0.36
TNXB-205ENST00000486148 TRIM64CA6NLI5 447 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 KLKB1P03952 638 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 ATP5C1P36542 298 aaKnown RBP17.31■□□□□ 0.36
TNXB-205ENST00000486148 TTPAP49638 278 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 HTR6P50406 440 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 PYCR3Q53H96 274 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 TMTC4Q5T4D3 741 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 LETMD1Q6P1Q0 360 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 TAS1R1Q7RTX1 841 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 EFL1Q7Z2Z2 1120 aaKnown RBP17.31■□□□□ 0.36
TNXB-205ENST00000486148 OFCC1Q8IZS5 231 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 PCSK9Q8NBP7 692 aaKnown RBP17.31■□□□□ 0.36
TNXB-205ENST00000486148 MUC13Q9H3R2 512 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 SOX17Q9H6I2 414 aaPredicted RBP17.31■□□□□ 0.36
TNXB-205ENST00000486148 ANAPC2Q9UJX6 822 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 ANKRD66B4E2M5 251 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 GIPC1O14908 333 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 TBC1D4O60343 1298 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 RHOCP08134 193 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 EEFSECP57772 596 aaKnown RBP17.31■□□□□ 0.36
TNXB-205ENST00000486148 OR4D2P58180 307 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 TRAF2Q12933 501 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 CENPSQ8N2Z9 138 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 SFRP1Q8N474 314 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 PAPD5Q8NDF8 572 aaKnown RBP17.31■□□□□ 0.36
TNXB-205ENST00000486148 BIRC7Q96CA5 298 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 SEPHS2Q99611 448 aa17.31■□□□□ 0.36
TNXB-205ENST00000486148 NACA2Q9H009 215 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms