RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 DTX3LQ8TDB6 740 aa20.49■□□□□ 0.87
LMBR1-217ENST00000485985 ALG3Q92685 438 aa20.49■□□□□ 0.87
LMBR1-217ENST00000485985 LACRTQ9GZZ8 138 aa20.49■□□□□ 0.87
LMBR1-217ENST00000485985 EPN3Q9H201 632 aa20.49■□□□□ 0.87
LMBR1-217ENST00000485985 POT1Q9NUX5 634 aa20.49■□□□□ 0.87
LMBR1-217ENST00000485985 TRIM10Q9UDY6 481 aa20.49■□□□□ 0.87
LMBR1-217ENST00000485985 ARL5AQ9Y689 179 aa20.49■□□□□ 0.87
LMBR1-217ENST00000485985 NBASA2RRP1 2371 aa20.49■□□□□ 0.87
LMBR1-217ENST00000485985 NKX2-8O15522 239 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 UBXN7O94888 489 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 ANKRD34CP0C6C1 535 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 IDSP22304 550 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 PSMB4P28070 264 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 PTPN7P35236 360 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 GTF2H3Q13889 308 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 GPR18Q14330 331 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 GPRC6AQ5T6X5 926 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 ZDHHC20Q5W0Z9 365 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 WASH2PQ6VEQ5 465 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 PLXDC1Q8IUK5 500 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 NLGN4XQ8N0W4 816 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 ACRBPQ8NEB7 543 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 NLGN4YQ8NFZ3 816 aaPredicted RBP20.48■□□□□ 0.87
LMBR1-217ENST00000485985 RSC1A1Q92681 617 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 OSBPL8Q9BZF1 889 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 GPN2Q9H9Y4 310 aaPredicted RBP20.48■□□□□ 0.87
LMBR1-217ENST00000485985 SLC40A1Q9NP59 571 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 WASH6PQ9NQA3 447 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 FBXO8Q9NRD0 319 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 LRRK2Q5S007 2527 aa20.48■□□□□ 0.87
LMBR1-217ENST00000485985 COL12A1Q99715 3063 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 CTNNA2P26232 953 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 MAP4P27816 1152 aaKnown RBP20.47■□□□□ 0.87
LMBR1-217ENST00000485985 ADRA1AP35348 466 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 CAPZBP47756 277 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 LEPRP48357 1165 aaKnown RBP20.47■□□□□ 0.87
LMBR1-217ENST00000485985 GEMP55040 296 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 LDLRAP1Q5SW96 308 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 CCDC181Q5TID7 509 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 FAM83HQ6ZRV2 1179 aaPredicted RBP20.47■□□□□ 0.87
LMBR1-217ENST00000485985 TMTC1Q8IUR5 882 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 LRRC57Q8N9N7 239 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 GPR150Q8NGU9 434 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 KIAA1143Q96AT1 154 aaPredicted RBP20.47■□□□□ 0.87
LMBR1-217ENST00000485985 C9orf72Q96LT7 481 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 TGM7Q96PF1 710 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 APOL2Q9BQE5 337 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 SMOXQ9NWM0 555 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 EFR3BQ9Y2G0 817 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 PKP3Q9Y446 797 aa20.47■□□□□ 0.87
LMBR1-217ENST00000485985 GRID2IPA4D2P6 1211 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 OR2AG2A6NM03 316 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 BTNL10A8MVZ5 291 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 ANXA9O76027 345 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 CASRP41180 1078 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 EIF3EP60228 445 aaKnown RBP20.46■□□□□ 0.87
LMBR1-217ENST00000485985 DMPKQ09013 629 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 ITGA9Q13797 1035 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 ANKRD20A2Q5SQ80 823 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 ANKRD20A1Q5TYW2 823 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 ANKRD20A3Q5VUR7 823 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 ITPRIPL1Q6GPH6 555 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 CEACAM20Q6UY09 585 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 TIPARPQ7Z3E1 657 aaKnown RBP20.46■□□□□ 0.87
LMBR1-217ENST00000485985 CDKL3Q8IVW4 592 aaPredicted RBP20.46■□□□□ 0.87
LMBR1-217ENST00000485985 BRSK1Q8TDC3 778 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 NAT14Q8WUY8 206 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 CXorf40BQ96DE9 158 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 TTC25Q96NG3 672 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 ZPBPQ9BS86 351 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 ZCCHC2Q9C0B9 1178 aaKnown RBP20.46■□□□□ 0.87
LMBR1-217ENST00000485985 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.46■□□□□ 0.87
LMBR1-217ENST00000485985 ANAPC2Q9UJX6 822 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 KCTD3Q9Y597 815 aa20.46■□□□□ 0.87
LMBR1-217ENST00000485985 LOC101059948A0A1B0GTJ6 334 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 CCDC66A2RUB6 948 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 STX7O15400 261 aaKnown RBP20.45■□□□□ 0.86
LMBR1-217ENST00000485985 KIF1CO43896 1103 aaKnown RBP20.45■□□□□ 0.86
LMBR1-217ENST00000485985 STK17BO94768 372 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 PRAMEF1O95521 474 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 PRKAR1AP10644 381 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 RBP3P10745 1247 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 PYGMP11217 842 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 VCLP18206 1134 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 FOXK1P85037 733 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 MSLNQ13421 630 aaPredicted RBP20.45■□□□□ 0.86
LMBR1-217ENST00000485985 UBAP2LQ14157 1087 aaKnown RBP20.45■□□□□ 0.86
LMBR1-217ENST00000485985 NFE2L1Q14494 772 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 RANBP10Q6VN20 620 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 AMZ2Q86W34 360 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 UNC5BQ8IZJ1 945 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 OR4K2Q8NGD2 314 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 C9orf43Q8TAL5 461 aaPredicted RBP20.45■□□□□ 0.86
LMBR1-217ENST00000485985 CCDC110Q8TBZ0 833 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 RNF31Q96EP0 1072 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 EFHD1Q9BUP0 239 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 ZNF768Q9H5H4 540 aaKnown RBP20.45■□□□□ 0.86
LMBR1-217ENST00000485985 ZNF71Q9NQZ8 489 aaPredicted RBP20.45■□□□□ 0.86
LMBR1-217ENST00000485985 ANKMY1Q9P2S6 941 aa20.45■□□□□ 0.86
LMBR1-217ENST00000485985 PSMD13Q9UNM6 376 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms